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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183679799
ORMF010105797
386061
Actinomycetota
CTG
Gln
>WENV183682085
ORMF010395694
346067
Actinomycetota
TAC
Val
>WENV183684408
ORMF010706950
28406
Actinomycetota
CGA
Ser
>WENV183686827
ORMF011058041
235720
Actinomycetota
CAT
Met
>WENV183687325
ORMF011130216
267445
Actinomycetota
GGT
Thr
>WENV183690008
ORMF011532788
28406
Actinomycetota
CGA
Ser
>WENV183690052
ORMF011539485
147843
Actinomycetota
GAC
Val
>WENV183690807
ORMF011653845
159454
Actinomycetota
CAT
Met
>WENV183691864
ORMF011830846
153948
Actinomycetota
GGG
Pro
>WENV183692447
ORMF011918928
411681
Actinomycetota
GCA
Cys
>WENV183692477
ORMF011923508
240960
Actinomycetota
TTC
Glu
>WENV183693049
ORMF012012825
262283
Actinomycetota
CTT
Lys
>WENV183693550
ORMF012098303
340609
Actinomycetota
GCC
Gly
>WENV183695769
ORMF012445245
236214
Actinomycetota
CCA
Trp
>WENV183695774
ORMF012446021
62910
Actinomycetota
CAG
Leu
>WENV183695811
ORMF012452441
235731
Actinomycetota
GGT
Thr
>WENV183696005
ORMF012485560
237356
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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