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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183614763
OOEA01000167
237493
Alphaproteobacteria
CCA
Trp
>WENV183614885
OOEA01006453
80917
Alphaproteobacteria
CAG
Leu
>WENV183614786
OOEA01000805
254294
Alphaproteobacteria
>WENV183615126
OOEA01065507
351510
Alphaproteobacteria
GAC
Val
>WENV183614857
OOEA01004171
58865
Alphaproteobacteria
GAG
Leu
>WENV183614815
OOEA01001876
25586
Alphaproteobacteria
TGA
Ser
>WENV183614919
OOEA01011591
267922
Alphaproteobacteria
CCA
Trp
>WENV183615188
OOEA01098644
10665
Alphaproteobacteria
GCT
Ser
>WENV183614897
OOEA01007725
146965
Alphaproteobacteria
CGG
Pro
>WENV183614871
OOEA01005463
241021
Alphaproteobacteria
GGC
Ala
>WENV183615120
OOEA01062804
113700
Alphaproteobacteria
>WENV183614870
OOEA01005125
421153
Alphaproteobacteria
>WENV183615057
OOEA01043836
23671
Alphaproteobacteria
CGA
Ser
>WENV183615050
OOEA01040881
147083
Alphaproteobacteria
GGG
Pro
>WENV183614988
OOEA01025496
16408
Alphaproteobacteria
GGA
Ser
>WENV183614879
OOEA01006150
95928
Alphaproteobacteria
TAG
Leu
>WENV183614920
OOEA01011667
162801
Alphaproteobacteria
GTG
His
>WENV183614759
OOEA01000005
339846
Alphaproteobacteria
GAC
Val
>WENV183614772
OOEA01000487
82652
Alphaproteobacteria
GTA
Tyr
>WENV183615172
OOEA01089149
147334
Alphaproteobacteria
CAT
Met
>WENV183614910
OOEA01010276
357160
Alphaproteobacteria
TTC
Glu
>WENV183614956
OOEA01020310
157999
Alphaproteobacteria
TCT
Arg
>WENV183614791
OOEA01000836
257000
Alphaproteobacteria
GAA
Phe
>WENV183614818
OOEA01002152
258175
Alphaproteobacteria
CGC
Ala
>WENV183614907
OOEA01009128
23672
Alphaproteobacteria
GCT
Ser
>WENV183615086
OOEA01052806
340106
Alphaproteobacteria
GCC
Gly
>WENV183614948
OOEA01018229
167926
Alphaproteobacteria
CAT
Met
>WENV183615089
OOEA01053258
348781
Alphaproteobacteria
GAA
Phe
>WENV183614844
OOEA01003504
147283
Alphaproteobacteria
GTG
His
>WENV183614770
OOEA01000406
352191
Alphaproteobacteria
GGT
Thr
>WENV183615196
OOEA01104279
160158
Alphaproteobacteria
GAT
Ile
>WENV183615235
OOEA01128694
412281
Alphaproteobacteria
CTG
Gln
>WENV183614776
OOEA01000622
146926
Alphaproteobacteria
GTG
His
>WENV183614805
OOEA01001316
26652
Alphaproteobacteria
GGA
Ser
>WENV183615092
OOEA01054121
113715
Alphaproteobacteria
TAG
Leu
>WENV183614950
OOEA01018907
150356
Alphaproteobacteria
GTC
Asp
>WENV183614942
OOEA01016877
174413
Alphaproteobacteria
CAT
Met
>WENV183615040
OOEA01036712
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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