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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183631051
OOGU01022721
147334
Alphaproteobacteria
CAT
Met
>WENV183631109
OOGU01032762
175748
Alphaproteobacteria
CAT
Met
>WENV183631271
OOGU01066589
174413
Alphaproteobacteria
CAT
Met
>WENV183631174
OOGU01045141
243806
Alphaproteobacteria
CCA
Trp
>WENV183631102
OOGU01031652
185767
Alphaproteobacteria
CCG
Arg
>WENV183631479
OOGU01128942
258175
Alphaproteobacteria
CGC
Ala
>WENV183631157
OOGU01042393
281959
Alphaproteobacteria
CGC
Ala
>WENV183630918
OOGU01008875
281959
Alphaproteobacteria
CGC
Ala
>WENV183630781
OOGU01002237
255832
Alphaproteobacteria
CGC
Ala
>WENV183630744
OOGU01001415
239160
Alphaproteobacteria
CGT
Thr
>WENV183630988
OOGU01014549
248021
Alphaproteobacteria
CTT
Lys
>WENV183630889
OOGU01007345
348781
Alphaproteobacteria
GAA
Phe
>WENV183630625
OOGU01000019
339846
Alphaproteobacteria
GAC
Val
>WENV183630632
OOGU01000030
59164
Alphaproteobacteria
GAG
Leu
>WENV183631149
OOGU01041532
340288
Alphaproteobacteria
GCC
Gly
>WENV183630935
OOGU01009909
340288
Alphaproteobacteria
GCC
Gly
>WENV183631029
OOGU01019756
340106
Alphaproteobacteria
GCC
Gly
>WENV183631399
OOGU01099844
364533
Alphaproteobacteria
GCC
Gly
>WENV183631098
OOGU01030518
147083
Alphaproteobacteria
GGG
Pro
>WENV183630929
OOGU01009636
339750
Alphaproteobacteria
GGT
Thr
>WENV183630673
OOGU01000283
352191
Alphaproteobacteria
GGT
Thr
>WENV183631452
OOGU01117079
99414
Alphaproteobacteria
GTA
Tyr
>WENV183630647
OOGU01000072
99414
Alphaproteobacteria
GTA
Tyr
>WENV183630882
OOGU01006698
150356
Alphaproteobacteria
GTC
Asp
>WENV183630637
OOGU01000039
150356
Alphaproteobacteria
GTC
Asp
>WENV183630633
OOGU01000032
146926
Alphaproteobacteria
GTG
His
>WENV183631222
OOGU01052998
252375
Alphaproteobacteria
GTT
Asn
>WENV183630771
OOGU01001891
345492
Alphaproteobacteria
TAC
Val
>WENV183631449
OOGU01117034
236256
Alphaproteobacteria
TAC
Val
>WENV183630622
OOGU01000015
25586
Alphaproteobacteria
TGA
Ser
>WENV183631426
OOGU01109077
242540
Alphaproteobacteria
TGC
Ala
>WENV183631137
OOGU01039804
281594
Alphaproteobacteria
TGT
Thr
>WENV183631492
OOGU01133649
238045
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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