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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183577957
OOCK01016950
309417
Bacillota
GGC
Ala
>WENV183577607
OOCK01000815
144612
Bacillota
TCT
Arg
>WENV183577661
OOCK01001255
144612
Bacillota
TCT
Arg
>WENV183577555
OOCK01000499
235098
Bacillota
GAC
Val
>WENV183577882
OOCK01008163
235098
Bacillota
GAC
Val
>WENV183577892
OOCK01009462
235098
Bacillota
GAC
Val
>WENV183577688
OOCK01001431
340263
Bacillota
TTC
Glu
>WENV183578003
OOCK01023943
340263
Bacillota
TTC
Glu
>WENV183577333
OOCK01000022
148239
Bacillota
TCT
Arg
>WENV183577770
OOCK01002405
44854
Bacillota
TGA
Ser
>WENV183577690
OOCK01001431
148348
Bacillota
GTC
Asp
>WENV183577876
OOCK01007350
144577
Bacillota
GAT
Ile
>WENV183577939
OOCK01014179
302150
Bacillota
TAC
Val
>WENV183577629
OOCK01000923
239080
Bacillota
CTG
Gln
>WENV183577936
OOCK01014149
338147
Bacillota
CTC
Glu
>WENV183577986
OOCK01021269
235150
Bacillota
TGC
Ala
>WENV183577916
OOCK01011877
235150
Bacillota
TGC
Ala
>WENV183577977
OOCK01020320
341763
Bacillota
CTC
Glu
>WENV183577992
OOCK01022049
429429
Bacillota
CCA
Trp
>WENV183577579
OOCK01000599
11034
Bacillota
GGA
Ser
>WENV183577691
OOCK01001431
239076
Bacillota
GAA
Phe
>WENV183577334
OOCK01000022
156937
Bacillota
GTG
His
>WENV183577768
OOCK01002393
235079
Bacillota
GAA
Phe
>WENV183577832
OOCK01004346
340265
Bacillota
GCC
Gly
>WENV183577875
OOCK01007350
235087
Bacillota
TGC
Ala
>WENV183577924
OOCK01012515
338149
Bacillota
CTC
Glu
>WENV183577516
OOCK01000352
37269
Bacillota
TGA
Ser
>WENV183577938
OOCK01014179
144599
Bacillota
GTC
Asp
>WENV183578031
OOCK01035277
153911
Bacillota
GAT
Ile
>WENV183577941
OOCK01014179
100326
Bacillota
GTA
Tyr
>WENV183577771
OOCK01002405
4624
Bacillota
GCT
Ser
>WENV183577931
OOCK01013489
235095
Bacillota
GGT
Thr
>WENV183577867
OOCK01006989
235095
Bacillota
GGT
Thr
>WENV183577779
OOCK01002557
235095
Bacillota
GGT
Thr
>WENV183577559
OOCK01000517
419639
Bacillota
GCA
Cys
>WENV183577689
OOCK01001431
239079
Bacillota
TAC
Val
>WENV183577692
OOCK01001431
304759
Bacillota
TAC
Val
>WENV183577822
OOCK01003959
411549
Bacillota
TTG
Gln
>WENV183577911
OOCK01011072
148188
Bacillota
CCG
Arg
>WENV183577729
OOCK01001957
148188
Bacillota
CCG
Arg
>WENV183577973
OOCK01019521
80612
Bacillota
GTA
Tyr
>WENV183578013
OOCK01027543
235124
Bacillota
TGG
Pro
>WENV183577928
OOCK01012751
338129
Bacillota
TGT
Thr
>WENV183577881
OOCK01007956
144583
Bacillota
ACG
Arg
>WENV183577811
OOCK01003520
238974
Bacillota
GAA
Phe
>WENV183577427
OOCK01000161
243098
Bacillota
GGT
Thr
>WENV183577792
OOCK01002915
58712
Bacillota
CAG
Leu
>WENV183577707
OOCK01001698
58712
Bacillota
CAG
Leu
>WENV183577625
OOCK01000909
58712
Bacillota
CAG
Leu
>WENV183577655
OOCK01001167
245296
Bacillota
CCC
Gly
>WENV183577925
OOCK01012515
272992
Bacillota
CTT
Lys
>WENV183577687
OOCK01001431
239078
Bacillota
TTT
Lys
>WENV183577558
OOCK01000517
344240
Bacillota
GCC
Gly
>WENV183577523
OOCK01000370
344240
Bacillota
GCC
Gly
>WENV183577682
OOCK01001403
196632
Bacillota
GTC
Asp
>WENV183577556
OOCK01000517
196632
Bacillota
GTC
Asp
>WENV183577522
OOCK01000370
196632
Bacillota
GTC
Asp
>WENV183577750
OOCK01002152
144594
Bacillota
CAC
Val
>WENV183577738
OOCK01002051
338128
Bacillota
TTC
Glu
>WENV183577683
OOCK01001403
245344
Bacillota
GAA
Phe
>WENV183577557
OOCK01000517
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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