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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183534405
OOAF01000007
338124
Bacteroidota
CCG
Arg
>WENV183534406
OOAF01000007
235102
Bacteroidota
CGT
Thr
>WENV183534408
OOAF01000008
95618
Bacteroidota
TAG
Leu
>WENV183534412
OOAF01000012
411543
Bacteroidota
CTG
Gln
>WENV183534415
OOAF01000013
235097
Bacteroidota
TTT
Lys
>WENV183534416
OOAF01000014
338486
Bacteroidota
CAT
Met
>WENV183534436
OOAF01000019
147439
Bacteroidota
TCT
Arg
>WENV183534437
OOAF01000019
240012
Bacteroidota
CCC
Gly
>WENV183534450
OOAF01000023
411550
Bacteroidota
CTG
Gln
>WENV183534468
OOAF01000034
338132
Bacteroidota
GCA
Cys
>WENV183534472
OOAF01000036
415410
Bacteroidota
TTG
Gln
>WENV183534474
OOAF01000038
144596
Bacteroidota
GGC
Ala
>WENV183534479
OOAF01000042
338164
Bacteroidota
TTC
Glu
>WENV183534480
OOAF01000042
343138
Bacteroidota
CCT
Arg
>WENV183534484
OOAF01000047
338155
Bacteroidota
CTC
Glu
>WENV183534488
OOAF01000051
144659
Bacteroidota
GTG
His
>WENV183534489
OOAF01000051
80614
Bacteroidota
>WENV183534495
OOAF01000058
126966
Bacteroidota
TAC
Val
>WENV183534504
OOAF01000069
59689
Bacteroidota
CAG
Leu
>WENV183534506
OOAF01000069
235180
Bacteroidota
CCA
Trp
>WENV183534509
OOAF01000070
58715
Bacteroidota
GAG
Leu
>WENV183534513
OOAF01000075
235097
Bacteroidota
TTT
Lys
>WENV183534518
OOAF01000080
80607
Bacteroidota
GTA
Tyr
>WENV183534521
OOAF01000081
155123
Bacteroidota
GTT
Asn
>WENV183534535
OOAF01000096
338132
Bacteroidota
GCA
Cys
>WENV183534537
OOAF01000100
149691
Bacteroidota
GTT
Asn
>WENV183534541
OOAF01000109
149691
Bacteroidota
GTT
Asn
>WENV183534547
OOAF01000112
16220
Bacteroidota
GGA
Ser
>WENV183534558
OOAF01000134
149691
Bacteroidota
GTT
Asn
>WENV183534560
OOAF01000138
338132
Bacteroidota
GCA
Cys
>WENV183534562
OOAF01000141
144933
Bacteroidota
TCT
Arg
>WENV183534563
OOAF01000142
46165
Bacteroidota
TGA
Ser
>WENV183534564
OOAF01000142
58714
Bacteroidota
CAA
Leu
>WENV183534577
OOAF01000159
144596
Bacteroidota
GGC
Ala
>WENV183534580
OOAF01000168
149691
Bacteroidota
GTT
Asn
>WENV183534596
OOAF01000188
16999
Bacteroidota
GGA
Ser
>WENV183534600
OOAF01000192
144656
Bacteroidota
GTG
His
>WENV183534601
OOAF01000193
149691
Bacteroidota
GTT
Asn
>WENV183534603
OOAF01000199
144933
Bacteroidota
TCT
Arg
>WENV183534607
OOAF01000208
144655
Bacteroidota
GGC
Ala
>WENV183534642
OOAF01000246
411629
Bacteroidota
TTG
Gln
>WENV183534654
OOAF01000260
80607
Bacteroidota
GTA
Tyr
>WENV183534660
OOAF01000271
44852
Bacteroidota
TAA
Leu
>WENV183534665
OOAF01000277
239647
Bacteroidota
TTT
Lys
>WENV183534687
OOAF01000308
44852
Bacteroidota
TAA
Leu
>WENV183534699
OOAF01000323
235129
Bacteroidota
GCC
Gly
>WENV183534702
OOAF01000334
338314
Bacteroidota
CCT
Arg
>WENV183534703
OOAF01000336
23696
Bacteroidota
GCT
Ser
>WENV183534704
OOAF01000336
338155
Bacteroidota
CTC
Glu
>WENV183534708
OOAF01000339
235129
Bacteroidota
GCC
Gly
>WENV183534709
OOAF01000340
243025
Bacteroidota
CAT
Met
>WENV183534724
OOAF01000385
144596
Bacteroidota
GGC
Ala
>WENV183534728
OOAF01000395
235097
Bacteroidota
TTT
Lys
>WENV183534729
OOAF01000397
235182
Bacteroidota
>WENV183534730
OOAF01000398
144590
Bacteroidota
GTT
Asn
>WENV183534732
OOAF01000400
80607
Bacteroidota
GTA
Tyr
>WENV183534744
OOAF01000417
149691
Bacteroidota
GTT
Asn
>WENV183534749
OOAF01000444
80607
Bacteroidota
GTA
Tyr
>WENV183534761
OOAF01000478
415410
Bacteroidota
TTG
Gln
>WENV183534762
OOAF01000480
240012
Bacteroidota
CCC
Gly
>WENV183534780
OOAF01000507
235207
Bacteroidota
CAT
Met
>WENV183534782
OOAF01000509
415410
Bacteroidota
TTG
Gln
>WENV183534784
OOAF01000512
235207
Bacteroidota
CAT
Met
>WENV183534792
OOAF01000531
338125
Bacteroidota
CCT
Arg
>WENV183534800
OOAF01000559
150845
Bacteroidota
GTC
Asp
>WENV183534803
OOAF01000571
126641
Bacteroidota
TAC
Val
>WENV183534812
OOAF01000588
23696
Bacteroidota
GCT
Ser
>WENV183534813
OOAF01000588
338132
Bacteroidota
GCA
Cys
>WENV183534827
OOAF01000630
338132
Bacteroidota
GCA
Cys
>WENV183534833
OOAF01000657
16224
Bacteroidota
GGA
Ser
>WENV183534838
OOAF01000672
344692
Bacteroidota
GGT
Thr
>WENV183534854
OOAF01000728
95559
Bacteroidota
TAG
Leu
>WENV183534924
OOAF01001021
338132
Bacteroidota
GCA
Cys
>WENV183534928
OOAF01001035
338165
Bacteroidota
GGT
Thr
>WENV183534934
OOAF01001052
235097
Bacteroidota
TTT
Lys
>WENV183534946
OOAF01001116
144657
Bacteroidota
CGG
Pro
>WENV183534958
OOAF01001154
45423
Bacteroidota
TGA
Ser
>WENV183534963
OOAF01001176
338486
Bacteroidota
CAT
Met
>WENV183534964
OOAF01001185
144688
Bacteroidota
CAT
Met
>WENV183534980
OOAF01001263
338132
Bacteroidota
GCA
Cys
>WENV183534989
OOAF01001341
16224
Bacteroidota
GGA
Ser
>WENV183535000
OOAF01001414
24174
Bacteroidota
GCT
Ser
>WENV183535008
OOAF01001468
338132
Bacteroidota
GCA
Cys
>WENV183535042
OOAF01001625
338486
Bacteroidota
CAT
Met
>WENV183535069
OOAF01001865
341950
Bacteroidota
>WENV183535072
OOAF01001897
80607
Bacteroidota
GTA
Tyr
>WENV183535091
OOAF01002109
126965
Bacteroidota
GGG
Pro
>WENV183535123
OOAF01002546
342206
Bacteroidota
TTC
Glu
>WENV183535131
OOAF01002659
144656
Bacteroidota
GTG
His
>WENV183535143
OOAF01002849
144659
Bacteroidota
GTG
His
>WENV183535173
OOAF01003514
411543
Bacteroidota
CTG
Gln
>WENV183535177
OOAF01003608
239647
Bacteroidota
TTT
Lys
>WENV183535180
OOAF01003753
414426
Bacteroidota
CTG
Gln
>WENV183535186
OOAF01003853
149691
Bacteroidota
GTT
Asn
>WENV183535196
OOAF01004158
154643
Bacteroidota
CAT
Met
>WENV183535198
OOAF01004158
80835
Bacteroidota
GTA
Tyr
>WENV183535229
OOAF01004870
95875
Bacteroidota
TAG
Leu
>WENV183535287
OOAF01006817
151960
Bacteroidota
GGC
Ala
>WENV183535316
OOAF01008503
146761
Bacteroidota
GAT
Ile
>WENV183535406
OOAF01015601
153993
Bacteroidota
GAT
Ile
>WENV183535427
OOAF01020714
237247
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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