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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183540762
OOAK01000343
235097
Bacteroidota
TTT
Lys
>WENV183540857
OOAK01000603
235097
Bacteroidota
TTT
Lys
>WENV183540605
OOAK01000097
235102
Bacteroidota
CGT
Thr
>WENV183541353
OOAK01016249
235102
Bacteroidota
CGT
Thr
>WENV183540921
OOAK01000977
338155
Bacteroidota
CTC
Glu
>WENV183540752
OOAK01000328
415410
Bacteroidota
TTG
Gln
>WENV183540479
OOAK01000001
338124
Bacteroidota
CCG
Arg
>WENV183541041
OOAK01001989
338124
Bacteroidota
CCG
Arg
>WENV183540565
OOAK01000053
338132
Bacteroidota
GCA
Cys
>WENV183540702
OOAK01000219
338132
Bacteroidota
GCA
Cys
>WENV183540855
OOAK01000581
338132
Bacteroidota
GCA
Cys
>WENV183540862
OOAK01000626
338132
Bacteroidota
GCA
Cys
>WENV183541123
OOAK01002954
301449
Bacteroidota
CGG
Pro
>WENV183540943
OOAK01001094
301449
Bacteroidota
CGG
Pro
>WENV183540595
OOAK01000081
301449
Bacteroidota
CGG
Pro
>WENV183540724
OOAK01000264
144933
Bacteroidota
TCT
Arg
>WENV183541317
OOAK01013709
144656
Bacteroidota
GTG
His
>WENV183541104
OOAK01002723
235207
Bacteroidota
CAT
Met
>WENV183540872
OOAK01000654
235207
Bacteroidota
CAT
Met
>WENV183540732
OOAK01000281
235207
Bacteroidota
CAT
Met
>WENV183540639
OOAK01000119
144596
Bacteroidota
GGC
Ala
>WENV183540936
OOAK01001032
80607
Bacteroidota
GTA
Tyr
>WENV183540525
OOAK01000019
80607
Bacteroidota
GTA
Tyr
>WENV183541040
OOAK01001985
16999
Bacteroidota
GGA
Ser
>WENV183541189
OOAK01004955
52358
Bacteroidota
TGA
Ser
>WENV183540477
OOAK01000001
52358
Bacteroidota
TGA
Ser
>WENV183540786
OOAK01000421
95559
Bacteroidota
TAG
Leu
>WENV183540515
OOAK01000011
419272
Bacteroidota
CTG
Gln
>WENV183541216
OOAK01005962
44852
Bacteroidota
TAA
Leu
>WENV183540631
OOAK01000111
44852
Bacteroidota
TAA
Leu
>WENV183541025
OOAK01001865
150485
Bacteroidota
GTT
Asn
>WENV183541059
OOAK01002118
132360
Bacteroidota
GGG
Pro
>WENV183540934
OOAK01001023
132360
Bacteroidota
GGG
Pro
>WENV183540745
OOAK01000313
132360
Bacteroidota
GGG
Pro
>WENV183540725
OOAK01000265
132360
Bacteroidota
GGG
Pro
>WENV183540517
OOAK01000011
132360
Bacteroidota
GGG
Pro
>WENV183541045
OOAK01002045
425638
Bacteroidota
CTG
Gln
>WENV183540666
OOAK01000157
425638
Bacteroidota
CTG
Gln
>WENV183540516
OOAK01000011
19317
Bacteroidota
GGA
Ser
>WENV183540641
OOAK01000124
16224
Bacteroidota
GGA
Ser
>WENV183541065
OOAK01002153
16220
Bacteroidota
GGA
Ser
>WENV183540914
OOAK01000921
338125
Bacteroidota
CCT
Arg
>WENV183540577
OOAK01000064
338125
Bacteroidota
CCT
Arg
>WENV183540856
OOAK01000587
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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