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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183555799
OOBN01015259
235102
Bacteroidota
CGT
Thr
>WENV183556055
OOBN01059167
267954
Bacteroidota
GCC
Gly
>WENV183555782
OOBN01014105
146761
Bacteroidota
GAT
Ile
>WENV183555625
OOBN01007074
144657
Bacteroidota
CGG
Pro
>WENV183555057
OOBN01000573
243025
Bacteroidota
CAT
Met
>WENV183555315
OOBN01001790
243025
Bacteroidota
CAT
Met
>WENV183555928
OOBN01028421
338155
Bacteroidota
CTC
Glu
>WENV183555417
OOBN01002716
126965
Bacteroidota
GGG
Pro
>WENV183555598
OOBN01006171
153993
Bacteroidota
GAT
Ile
>WENV183555308
OOBN01001729
343138
Bacteroidota
CCT
Arg
>WENV183555500
OOBN01003948
58715
Bacteroidota
GAG
Leu
>WENV183555046
OOBN01000544
17323
Bacteroidota
GGA
Ser
>WENV183555885
OOBN01022957
24174
Bacteroidota
GCT
Ser
>WENV183555262
OOBN01001403
338486
Bacteroidota
CAT
Met
>WENV183555482
OOBN01003682
415410
Bacteroidota
TTG
Gln
>WENV183554873
OOBN01000188
415410
Bacteroidota
TTG
Gln
>WENV183555088
OOBN01000703
136244
Bacteroidota
TAC
Val
>WENV183555398
OOBN01002512
155123
Bacteroidota
GTT
Asn
>WENV183555299
OOBN01001663
344692
Bacteroidota
GGT
Thr
>WENV183554896
OOBN01000235
344692
Bacteroidota
GGT
Thr
>WENV183554769
OOBN01000099
344692
Bacteroidota
GGT
Thr
>WENV183555089
OOBN01000705
338124
Bacteroidota
CCG
Arg
>WENV183554823
OOBN01000152
146800
Bacteroidota
>WENV183555319
OOBN01001833
238121
Bacteroidota
CTT
Lys
>WENV183555951
OOBN01031970
126641
Bacteroidota
TAC
Val
>WENV183555321
OOBN01001848
338132
Bacteroidota
GCA
Cys
>WENV183554886
OOBN01000220
338132
Bacteroidota
GCA
Cys
>WENV183554890
OOBN01000225
58714
Bacteroidota
CAA
Leu
>WENV183555255
OOBN01001371
235165
Bacteroidota
CCA
Trp
>WENV183555144
OOBN01000875
235165
Bacteroidota
CCA
Trp
>WENV183554919
OOBN01000284
301449
Bacteroidota
CGG
Pro
>WENV183555697
OOBN01008938
144933
Bacteroidota
TCT
Arg
>WENV183554859
OOBN01000174
144933
Bacteroidota
TCT
Arg
>WENV183554635
OOBN01000010
171336
Bacteroidota
GGC
Ala
>WENV183554949
OOBN01000332
144656
Bacteroidota
GTG
His
>WENV183554805
OOBN01000130
235207
Bacteroidota
CAT
Met
>WENV183555597
OOBN01006118
80607
Bacteroidota
GTA
Tyr
>WENV183554953
OOBN01000345
80607
Bacteroidota
GTA
Tyr
>WENV183555140
OOBN01000844
80614
Bacteroidota
>WENV183555353
OOBN01002120
52358
Bacteroidota
TGA
Ser
>WENV183555004
OOBN01000453
52358
Bacteroidota
TGA
Ser
>WENV183555204
OOBN01001125
154643
Bacteroidota
CAT
Met
>WENV183554699
OOBN01000044
154643
Bacteroidota
CAT
Met
>WENV183555967
OOBN01034820
144590
Bacteroidota
GTT
Asn
>WENV183555087
OOBN01000699
419272
Bacteroidota
CTG
Gln
>WENV183555009
OOBN01000467
144655
Bacteroidota
GGC
Ala
>WENV183555148
OOBN01000886
144639
Bacteroidota
GGC
Ala
>WENV183555532
OOBN01004487
263771
Bacteroidota
CTT
Lys
>WENV183554637
OOBN01000011
338164
Bacteroidota
TTC
Glu
>WENV183555149
OOBN01000894
95875
Bacteroidota
TAG
Leu
>WENV183555130
OOBN01000804
240012
Bacteroidota
CCC
Gly
>WENV183555529
OOBN01004421
147439
Bacteroidota
TCT
Arg
>WENV183555780
OOBN01013981
280513
Bacteroidota
TTT
Lys
>WENV183555553
OOBN01004739
150485
Bacteroidota
GTT
Asn
>WENV183554636
OOBN01000011
150485
Bacteroidota
GTT
Asn
>WENV183555413
OOBN01002674
132360
Bacteroidota
GGG
Pro
>WENV183555470
OOBN01003545
425638
Bacteroidota
CTG
Gln
>WENV183554660
OOBN01000025
425638
Bacteroidota
CTG
Gln
>WENV183555703
OOBN01009341
353927
Bacteroidota
TTC
Glu
>WENV183554819
OOBN01000148
353927
Bacteroidota
TTC
Glu
>WENV183554754
OOBN01000085
353927
Bacteroidota
TTC
Glu
>WENV183554695
OOBN01000040
353927
Bacteroidota
TTC
Glu
>WENV183556044
OOBN01054766
146530
Bacteroidota
TGT
Thr
>WENV183554992
OOBN01000426
414426
Bacteroidota
CTG
Gln
>WENV183554756
OOBN01000087
414426
Bacteroidota
CTG
Gln
>WENV183555608
OOBN01006481
16224
Bacteroidota
GGA
Ser
>WENV183555607
OOBN01006473
151960
Bacteroidota
GGC
Ala
>WENV183555944
OOBN01031243
16220
Bacteroidota
GGA
Ser
>WENV183555101
OOBN01000754
338125
Bacteroidota
CCT
Arg
>WENV183555139
OOBN01000838
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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