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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183572640
OOCG01000004
235097
Bacteroidota
TTT
Lys
>WENV183572817
OOCG01000337
95987
Bacteroidota
CAA
Leu
>WENV183572897
OOCG01000679
95987
Bacteroidota
CAA
Leu
>WENV183573330
OOCG01017494
339412
Bacteroidota
GGT
Thr
>WENV183572691
OOCG01000048
235102
Bacteroidota
CGT
Thr
>WENV183572711
OOCG01000073
235102
Bacteroidota
CGT
Thr
>WENV183573335
OOCG01019167
97336
Bacteroidota
CAG
Leu
>WENV183573277
OOCG01010036
338155
Bacteroidota
CTC
Glu
>WENV183572976
OOCG01001094
413663
Bacteroidota
CTG
Gln
>WENV183572975
OOCG01001094
413663
Bacteroidota
CTG
Gln
>WENV183572757
OOCG01000193
413663
Bacteroidota
CTG
Gln
>WENV183572756
OOCG01000193
413663
Bacteroidota
CTG
Gln
>WENV183572977
OOCG01001109
415410
Bacteroidota
TTG
Gln
>WENV183572842
OOCG01000446
415410
Bacteroidota
TTG
Gln
>WENV183573170
OOCG01004254
136244
Bacteroidota
TAC
Val
>WENV183572873
OOCG01000571
136244
Bacteroidota
TAC
Val
>WENV183572872
OOCG01000571
136244
Bacteroidota
TAC
Val
>WENV183572825
OOCG01000378
136244
Bacteroidota
TAC
Val
>WENV183573230
OOCG01007141
237797
Bacteroidota
CCA
Trp
>WENV183573229
OOCG01007111
237797
Bacteroidota
CCA
Trp
>WENV183572717
OOCG01000090
144695
Bacteroidota
CAT
Met
>WENV183572862
OOCG01000508
412479
Bacteroidota
TTG
Gln
>WENV183572746
OOCG01000164
412479
Bacteroidota
TTG
Gln
>WENV183572966
OOCG01001002
147147
Bacteroidota
GTG
His
>WENV183572751
OOCG01000189
147147
Bacteroidota
GTG
His
>WENV183572745
OOCG01000162
338124
Bacteroidota
CCG
Arg
>WENV183572656
OOCG01000013
338124
Bacteroidota
CCG
Arg
>WENV183573143
OOCG01003268
338132
Bacteroidota
GCA
Cys
>WENV183573110
OOCG01002546
338132
Bacteroidota
GCA
Cys
>WENV183572938
OOCG01000824
338132
Bacteroidota
GCA
Cys
>WENV183572930
OOCG01000807
338132
Bacteroidota
GCA
Cys
>WENV183572889
OOCG01000622
338132
Bacteroidota
GCA
Cys
>WENV183572888
OOCG01000622
338132
Bacteroidota
GCA
Cys
>WENV183573305
OOCG01013414
144688
Bacteroidota
CAT
Met
>WENV183573123
OOCG01002787
193809
Bacteroidota
CAT
Met
>WENV183573206
OOCG01005381
144933
Bacteroidota
TCT
Arg
>WENV183572657
OOCG01000014
144656
Bacteroidota
GTG
His
>WENV183572781
OOCG01000247
235207
Bacteroidota
CAT
Met
>WENV183572750
OOCG01000187
235207
Bacteroidota
CAT
Met
>WENV183572668
OOCG01000025
235207
Bacteroidota
CAT
Met
>WENV183573048
OOCG01001794
144596
Bacteroidota
GGC
Ala
>WENV183572665
OOCG01000024
113604
Bacteroidota
>WENV183573212
OOCG01005791
344769
Bacteroidota
CTC
Glu
>WENV183573047
OOCG01001751
344769
Bacteroidota
CTC
Glu
>WENV183573035
OOCG01001719
344769
Bacteroidota
CTC
Glu
>WENV183572791
OOCG01000269
344769
Bacteroidota
CTC
Glu
>WENV183572916
OOCG01000744
16999
Bacteroidota
GGA
Ser
>WENV183573003
OOCG01001280
52358
Bacteroidota
TGA
Ser
>WENV183572960
OOCG01000950
52358
Bacteroidota
TGA
Ser
>WENV183572947
OOCG01000864
52358
Bacteroidota
TGA
Ser
>WENV183572866
OOCG01000532
52358
Bacteroidota
TGA
Ser
>WENV183572765
OOCG01000213
52358
Bacteroidota
TGA
Ser
>WENV183572689
OOCG01000045
52358
Bacteroidota
TGA
Ser
>WENV183573345
OOCG01022966
175704
Bacteroidota
TGC
Ala
>WENV183572987
OOCG01001169
144590
Bacteroidota
GTT
Asn
>WENV183572986
OOCG01001169
144590
Bacteroidota
GTT
Asn
>WENV183572722
OOCG01000095
95559
Bacteroidota
TAG
Leu
>WENV183572741
OOCG01000145
419272
Bacteroidota
CTG
Gln
>WENV183572693
OOCG01000051
419272
Bacteroidota
CTG
Gln
>WENV183572729
OOCG01000110
144655
Bacteroidota
GGC
Ala
>WENV183572923
OOCG01000778
150485
Bacteroidota
GTT
Asn
>WENV183573097
OOCG01002211
196394
Bacteroidota
GTC
Asp
>WENV183573038
OOCG01001719
196394
Bacteroidota
GTC
Asp
>WENV183572997
OOCG01001252
196394
Bacteroidota
GTC
Asp
>WENV183572738
OOCG01000128
132360
Bacteroidota
GGG
Pro
>WENV183572692
OOCG01000051
132360
Bacteroidota
GGG
Pro
>WENV183572739
OOCG01000131
425638
Bacteroidota
CTG
Gln
>WENV183572694
OOCG01000051
19317
Bacteroidota
GGA
Ser
>WENV183573276
OOCG01010036
23696
Bacteroidota
GCT
Ser
>WENV183572950
OOCG01000870
412236
Bacteroidota
CCC
Gly
>WENV183572658
OOCG01000014
16224
Bacteroidota
GGA
Ser
>WENV183572742
OOCG01000145
16220
Bacteroidota
GGA
Ser
>WENV183572786
OOCG01000257
338125
Bacteroidota
CCT
Arg
>WENV183572697
OOCG01000064
338125
Bacteroidota
CCT
Arg
>WENV183573228
OOCG01006947
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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