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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183573631
OOCH01000333
235097
Bacteroidota
TTT
Lys
>WENV183573663
OOCH01000394
235097
Bacteroidota
TTT
Lys
>WENV183573367
OOCH01000003
95987
Bacteroidota
CAA
Leu
>WENV183573651
OOCH01000372
95987
Bacteroidota
CAA
Leu
>WENV183573487
OOCH01000120
339412
Bacteroidota
GGT
Thr
>WENV183573426
OOCH01000064
235102
Bacteroidota
CGT
Thr
>WENV183573862
OOCH01001100
243025
Bacteroidota
CAT
Met
>WENV183573469
OOCH01000104
343138
Bacteroidota
CCT
Arg
>WENV183573715
OOCH01000544
17323
Bacteroidota
GGA
Ser
>WENV183573639
OOCH01000350
413663
Bacteroidota
CTG
Gln
>WENV183573381
OOCH01000013
415410
Bacteroidota
TTG
Gln
>WENV183573468
OOCH01000098
136244
Bacteroidota
TAC
Val
>WENV183573403
OOCH01000033
136244
Bacteroidota
TAC
Val
>WENV183573402
OOCH01000033
136244
Bacteroidota
TAC
Val
>WENV183573488
OOCH01000120
237797
Bacteroidota
CCA
Trp
>WENV183574714
OOCH01060468
20893
Bacteroidota
GGA
Ser
>WENV183573507
OOCH01000144
412479
Bacteroidota
TTG
Gln
>WENV183573433
OOCH01000072
412479
Bacteroidota
TTG
Gln
>WENV183573430
OOCH01000067
147147
Bacteroidota
GTG
His
>WENV183573429
OOCH01000067
147147
Bacteroidota
GTG
His
>WENV183573953
OOCH01001647
344692
Bacteroidota
GGT
Thr
>WENV183573595
OOCH01000273
344692
Bacteroidota
GGT
Thr
>WENV183573916
OOCH01001364
145504
Bacteroidota
TGT
Thr
>WENV183573450
OOCH01000089
353373
Bacteroidota
>WENV183573693
OOCH01000498
338124
Bacteroidota
CCG
Arg
>WENV183574360
OOCH01008980
168744
Bacteroidota
GTG
His
>WENV183574512
OOCH01020726
238121
Bacteroidota
CTT
Lys
>WENV183574395
OOCH01010868
126641
Bacteroidota
TAC
Val
>WENV183574223
OOCH01004279
338132
Bacteroidota
GCA
Cys
>WENV183573451
OOCH01000090
338132
Bacteroidota
GCA
Cys
>WENV183573636
OOCH01000342
193809
Bacteroidota
CAT
Met
>WENV183573589
OOCH01000262
37076
Bacteroidota
TAA
Leu
>WENV183573432
OOCH01000072
37076
Bacteroidota
TAA
Leu
>WENV183574193
OOCH01003639
235165
Bacteroidota
CCA
Trp
>WENV183573520
OOCH01000173
301449
Bacteroidota
CGG
Pro
>WENV183573533
OOCH01000194
303954
Bacteroidota
GCC
Gly
>WENV183573532
OOCH01000194
303954
Bacteroidota
GCC
Gly
>WENV183573923
OOCH01001376
171336
Bacteroidota
GGC
Ala
>WENV183574244
OOCH01004797
235207
Bacteroidota
CAT
Met
>WENV183573757
OOCH01000652
235207
Bacteroidota
CAT
Met
>WENV183573659
OOCH01000382
235207
Bacteroidota
CAT
Met
>WENV183573562
OOCH01000223
80607
Bacteroidota
GTA
Tyr
>WENV183573812
OOCH01000886
113604
Bacteroidota
>WENV183573885
OOCH01001198
344769
Bacteroidota
CTC
Glu
>WENV183573389
OOCH01000023
52358
Bacteroidota
TGA
Ser
>WENV183574740
OOCH01072595
154643
Bacteroidota
CAT
Met
>WENV183574434
OOCH01013458
175704
Bacteroidota
TGC
Ala
>WENV183573455
OOCH01000092
144590
Bacteroidota
GTT
Asn
>WENV183573529
OOCH01000189
95559
Bacteroidota
TAG
Leu
>WENV183573609
OOCH01000287
419272
Bacteroidota
CTG
Gln
>WENV183573883
OOCH01001187
144655
Bacteroidota
GGC
Ala
>WENV183574260
OOCH01005391
144639
Bacteroidota
GGC
Ala
>WENV183573940
OOCH01001488
263771
Bacteroidota
CTT
Lys
>WENV183574214
OOCH01004011
95875
Bacteroidota
TAG
Leu
>WENV183574454
OOCH01014822
240012
Bacteroidota
CCC
Gly
>WENV183573809
OOCH01000883
44852
Bacteroidota
TAA
Leu
>WENV183573481
OOCH01000112
44852
Bacteroidota
TAA
Leu
>WENV183573385
OOCH01000017
44852
Bacteroidota
TAA
Leu
>WENV183574046
OOCH01002147
150485
Bacteroidota
GTT
Asn
>WENV183573810
OOCH01000883
150485
Bacteroidota
GTT
Asn
>WENV183573383
OOCH01000017
150485
Bacteroidota
GTT
Asn
>WENV183574215
OOCH01004037
196394
Bacteroidota
GTC
Asp
>WENV183573867
OOCH01001125
196394
Bacteroidota
GTC
Asp
>WENV183573986
OOCH01001815
50727
Bacteroidota
TGA
Ser
>WENV183574710
OOCH01058251
132360
Bacteroidota
GGG
Pro
>WENV183573632
OOCH01000333
132360
Bacteroidota
GGG
Pro
>WENV183573572
OOCH01000238
132360
Bacteroidota
GGG
Pro
>WENV183573644
OOCH01000353
425638
Bacteroidota
CTG
Gln
>WENV183574005
OOCH01001945
353927
Bacteroidota
TTC
Glu
>WENV183573926
OOCH01001407
353927
Bacteroidota
TTC
Glu
>WENV183573502
OOCH01000136
353927
Bacteroidota
TTC
Glu
>WENV183573505
OOCH01000143
414426
Bacteroidota
CTG
Gln
>WENV183573660
OOCH01000384
16224
Bacteroidota
GGA
Ser
>WENV183574683
OOCH01052360
151960
Bacteroidota
GGC
Ala
>WENV183573610
OOCH01000287
16220
Bacteroidota
GGA
Ser
>WENV183573743
OOCH01000623
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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