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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183595107
OODC01001879
235097
Bacteroidota
TTT
Lys
>WENV183595473
OODC01033850
235102
Bacteroidota
CGT
Thr
>WENV183595458
OODC01029316
144657
Bacteroidota
CGG
Pro
>WENV183595332
OODC01009145
338155
Bacteroidota
CTC
Glu
>WENV183595032
OODC01001107
415410
Bacteroidota
TTG
Gln
>WENV183595285
OODC01005808
188343
Bacteroidota
TGC
Ala
>WENV183594906
OODC01000557
338124
Bacteroidota
CCG
Arg
>WENV183595070
OODC01001322
338132
Bacteroidota
GCA
Cys
>WENV183594802
OODC01000219
338132
Bacteroidota
GCA
Cys
>WENV183594715
OODC01000110
338132
Bacteroidota
GCA
Cys
>WENV183594714
OODC01000110
338132
Bacteroidota
GCA
Cys
>WENV183594849
OODC01000334
144656
Bacteroidota
GTG
His
>WENV183595348
OODC01010023
235207
Bacteroidota
CAT
Met
>WENV183595204
OODC01003394
235207
Bacteroidota
CAT
Met
>WENV183594883
OODC01000476
235207
Bacteroidota
CAT
Met
>WENV183594688
OODC01000076
235207
Bacteroidota
CAT
Met
>WENV183594830
OODC01000296
80607
Bacteroidota
GTA
Tyr
>WENV183595002
OODC01000982
113604
Bacteroidota
>WENV183595071
OODC01001351
144590
Bacteroidota
GTT
Asn
>WENV183594768
OODC01000174
95559
Bacteroidota
TAG
Leu
>WENV183595086
OODC01001467
419272
Bacteroidota
CTG
Gln
>WENV183594881
OODC01000473
144655
Bacteroidota
GGC
Ala
>WENV183594957
OODC01000727
44852
Bacteroidota
TAA
Leu
>WENV183594862
OODC01000365
44852
Bacteroidota
TAA
Leu
>WENV183595266
OODC01005212
150485
Bacteroidota
GTT
Asn
>WENV183595265
OODC01005212
150485
Bacteroidota
GTT
Asn
>WENV183595248
OODC01004623
150485
Bacteroidota
GTT
Asn
>WENV183595166
OODC01002573
50727
Bacteroidota
TGA
Ser
>WENV183595000
OODC01000982
50727
Bacteroidota
TGA
Ser
>WENV183594937
OODC01000653
50727
Bacteroidota
TGA
Ser
>WENV183594907
OODC01000560
50727
Bacteroidota
TGA
Ser
>WENV183594871
OODC01000432
50727
Bacteroidota
TGA
Ser
>WENV183594793
OODC01000203
50727
Bacteroidota
TGA
Ser
>WENV183595084
OODC01001457
132360
Bacteroidota
GGG
Pro
>WENV183594803
OODC01000224
132360
Bacteroidota
GGG
Pro
>WENV183595413
OODC01018916
425638
Bacteroidota
CTG
Gln
>WENV183595022
OODC01001038
16224
Bacteroidota
GGA
Ser
>WENV183595291
OODC01006066
16220
Bacteroidota
GGA
Ser
>WENV183594897
OODC01000517
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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