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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183596504
OODE01000471
235097
Bacteroidota
TTT
Lys
>WENV183596806
OODE01003602
235102
Bacteroidota
CGT
Thr
>WENV183596965
OODE01010494
146761
Bacteroidota
GAT
Ile
>WENV183597115
OODE01042536
144657
Bacteroidota
CGG
Pro
>WENV183597021
OODE01018980
126965
Bacteroidota
GGG
Pro
>WENV183596634
OODE01001338
343138
Bacteroidota
CCT
Arg
>WENV183596602
OODE01001124
58715
Bacteroidota
GAG
Leu
>WENV183596767
OODE01003240
338486
Bacteroidota
CAT
Met
>WENV183596636
OODE01001356
415410
Bacteroidota
TTG
Gln
>WENV183596724
OODE01002386
415410
Bacteroidota
TTG
Gln
>WENV183596601
OODE01001124
59689
Bacteroidota
CAG
Leu
>WENV183596532
OODE01000675
338124
Bacteroidota
CCG
Arg
>WENV183596681
OODE01001832
235203
Bacteroidota
TTT
Lys
>WENV183596567
OODE01000897
338132
Bacteroidota
GCA
Cys
>WENV183596530
OODE01000652
338132
Bacteroidota
GCA
Cys
>WENV183596529
OODE01000652
338132
Bacteroidota
GCA
Cys
>WENV183596693
OODE01001946
45423
Bacteroidota
TGA
Ser
>WENV183596836
OODE01004349
193809
Bacteroidota
CAT
Met
>WENV183596352
OODE01000157
58714
Bacteroidota
CAA
Leu
>WENV183596491
OODE01000438
144933
Bacteroidota
TCT
Arg
>WENV183596422
OODE01000290
144656
Bacteroidota
GTG
His
>WENV183596555
OODE01000790
235207
Bacteroidota
CAT
Met
>WENV183596640
OODE01001385
144659
Bacteroidota
GTG
His
>WENV183596935
OODE01008207
144596
Bacteroidota
GGC
Ala
>WENV183596835
OODE01004312
80607
Bacteroidota
GTA
Tyr
>WENV183596393
OODE01000211
80607
Bacteroidota
GTA
Tyr
>WENV183596741
OODE01002621
80614
Bacteroidota
>WENV183596928
OODE01007669
52358
Bacteroidota
TGA
Ser
>WENV183596833
OODE01004261
52358
Bacteroidota
TGA
Ser
>WENV183596443
OODE01000307
52358
Bacteroidota
TGA
Ser
>WENV183596342
OODE01000139
52358
Bacteroidota
TGA
Ser
>WENV183596558
OODE01000800
95559
Bacteroidota
TAG
Leu
>WENV183596517
OODE01000578
419272
Bacteroidota
CTG
Gln
>WENV183596603
OODE01001140
144655
Bacteroidota
GGC
Ala
>WENV183596727
OODE01002428
95875
Bacteroidota
TAG
Leu
>WENV183596647
OODE01001423
95875
Bacteroidota
TAG
Leu
>WENV183596662
OODE01001571
147439
Bacteroidota
TCT
Arg
>WENV183596897
OODE01006402
150485
Bacteroidota
GTT
Asn
>WENV183596674
OODE01001681
411550
Bacteroidota
CTG
Gln
>WENV183596409
OODE01000268
132360
Bacteroidota
GGG
Pro
>WENV183596197
OODE01000006
132360
Bacteroidota
GGG
Pro
>WENV183596229
OODE01000021
425638
Bacteroidota
CTG
Gln
>WENV183596198
OODE01000006
425638
Bacteroidota
CTG
Gln
>WENV183597127
OODE01046190
19317
Bacteroidota
GGA
Ser
>WENV183596314
OODE01000102
16224
Bacteroidota
GGA
Ser
>WENV183596570
OODE01000927
16220
Bacteroidota
GGA
Ser
>WENV183596445
OODE01000321
338125
Bacteroidota
CCT
Arg
>WENV183596233
OODE01000026
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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