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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183601244
OODJ01000528
95987
Bacteroidota
CAA
Leu
>WENV183601295
OODJ01000673
339412
Bacteroidota
GGT
Thr
>WENV183601645
OODJ01002732
235102
Bacteroidota
CGT
Thr
>WENV183602461
OODJ01065334
267954
Bacteroidota
GCC
Gly
>WENV183601552
OODJ01001900
237796
Bacteroidota
CGT
Thr
>WENV183602466
OODJ01067516
144657
Bacteroidota
CGG
Pro
>WENV183601499
OODJ01001548
243025
Bacteroidota
CAT
Met
>WENV183601067
OODJ01000201
243025
Bacteroidota
CAT
Met
>WENV183600867
OODJ01000031
126966
Bacteroidota
TAC
Val
>WENV183601211
OODJ01000460
338155
Bacteroidota
CTC
Glu
>WENV183601520
OODJ01001686
126965
Bacteroidota
GGG
Pro
>WENV183602163
OODJ01019188
153993
Bacteroidota
GAT
Ile
>WENV183601765
OODJ01004121
58715
Bacteroidota
GAG
Leu
>WENV183601088
OODJ01000231
17323
Bacteroidota
GGA
Ser
>WENV183600963
OODJ01000096
24174
Bacteroidota
GCT
Ser
>WENV183602171
OODJ01019302
338486
Bacteroidota
CAT
Met
>WENV183601714
OODJ01003533
413663
Bacteroidota
CTG
Gln
>WENV183600922
OODJ01000060
413663
Bacteroidota
CTG
Gln
>WENV183601060
OODJ01000191
415410
Bacteroidota
TTG
Gln
>WENV183601033
OODJ01000160
415410
Bacteroidota
TTG
Gln
>WENV183600881
OODJ01000037
136244
Bacteroidota
TAC
Val
>WENV183601296
OODJ01000673
237797
Bacteroidota
CCA
Trp
>WENV183600988
OODJ01000111
412479
Bacteroidota
TTG
Gln
>WENV183601748
OODJ01003998
147147
Bacteroidota
GTG
His
>WENV183601215
OODJ01000468
147147
Bacteroidota
GTG
His
>WENV183600834
OODJ01000010
155123
Bacteroidota
GTT
Asn
>WENV183601352
OODJ01000914
344692
Bacteroidota
GGT
Thr
>WENV183600827
OODJ01000006
145504
Bacteroidota
TGT
Thr
>WENV183602048
OODJ01013170
341950
Bacteroidota
>WENV183601743
OODJ01003965
341950
Bacteroidota
>WENV183601240
OODJ01000516
338124
Bacteroidota
CCG
Arg
>WENV183601928
OODJ01007990
126641
Bacteroidota
TAC
Val
>WENV183601299
OODJ01000692
338132
Bacteroidota
GCA
Cys
>WENV183601223
OODJ01000479
338132
Bacteroidota
GCA
Cys
>WENV183601079
OODJ01000217
338132
Bacteroidota
GCA
Cys
>WENV183600878
OODJ01000036
235165
Bacteroidota
CCA
Trp
>WENV183601306
OODJ01000724
144933
Bacteroidota
TCT
Arg
>WENV183601000
OODJ01000118
144656
Bacteroidota
GTG
His
>WENV183600856
OODJ01000024
144656
Bacteroidota
GTG
His
>WENV183601279
OODJ01000642
235207
Bacteroidota
CAT
Met
>WENV183601494
OODJ01001511
144596
Bacteroidota
GGC
Ala
>WENV183601309
OODJ01000758
144596
Bacteroidota
GGC
Ala
>WENV183601477
OODJ01001406
80607
Bacteroidota
GTA
Tyr
>WENV183601142
OODJ01000338
80607
Bacteroidota
GTA
Tyr
>WENV183600953
OODJ01000091
80607
Bacteroidota
GTA
Tyr
>WENV183601485
OODJ01001476
412235
Bacteroidota
>WENV183601188
OODJ01000409
344769
Bacteroidota
CTC
Glu
>WENV183601805
OODJ01004868
52358
Bacteroidota
TGA
Ser
>WENV183601241
OODJ01000521
52358
Bacteroidota
TGA
Ser
>WENV183601204
OODJ01000440
52358
Bacteroidota
TGA
Ser
>WENV183601161
OODJ01000381
52358
Bacteroidota
TGA
Ser
>WENV183601015
OODJ01000139
52358
Bacteroidota
TGA
Ser
>WENV183601671
OODJ01002996
154643
Bacteroidota
CAT
Met
>WENV183600838
OODJ01000011
144590
Bacteroidota
GTT
Asn
>WENV183601059
OODJ01000190
95559
Bacteroidota
TAG
Leu
>WENV183601265
OODJ01000596
419272
Bacteroidota
CTG
Gln
>WENV183601012
OODJ01000135
144655
Bacteroidota
GGC
Ala
>WENV183600826
OODJ01000006
144639
Bacteroidota
GGC
Ala
>WENV183602334
OODJ01037270
338164
Bacteroidota
TTC
Glu
>WENV183601652
OODJ01002826
95875
Bacteroidota
TAG
Leu
>WENV183601410
OODJ01001172
44852
Bacteroidota
TAA
Leu
>WENV183601130
OODJ01000322
44852
Bacteroidota
TAA
Leu
>WENV183600837
OODJ01000011
44852
Bacteroidota
TAA
Leu
>WENV183601885
OODJ01006845
147439
Bacteroidota
TCT
Arg
>WENV183601647
OODJ01002749
280513
Bacteroidota
TTT
Lys
>WENV183600828
OODJ01000007
150485
Bacteroidota
GTT
Asn
>WENV183601986
OODJ01010657
95986
Bacteroidota
GTA
Tyr
>WENV183601479
OODJ01001408
196394
Bacteroidota
GTC
Asp
>WENV183602044
OODJ01012961
132360
Bacteroidota
GGG
Pro
>WENV183601742
OODJ01003965
132360
Bacteroidota
GGG
Pro
>WENV183601065
OODJ01000199
132360
Bacteroidota
GGG
Pro
>WENV183601430
OODJ01001263
425638
Bacteroidota
CTG
Gln
>WENV183601307
OODJ01000725
425638
Bacteroidota
CTG
Gln
>WENV183600957
OODJ01000093
353927
Bacteroidota
TTC
Glu
>WENV183600875
OODJ01000036
353927
Bacteroidota
TTC
Glu
>WENV183601210
OODJ01000460
23696
Bacteroidota
GCT
Ser
>WENV183601104
OODJ01000265
414426
Bacteroidota
CTG
Gln
>WENV183601018
OODJ01000143
414426
Bacteroidota
CTG
Gln
>WENV183601718
OODJ01003568
146764
Bacteroidota
GTC
Asp
>WENV183601418
OODJ01001198
16224
Bacteroidota
GGA
Ser
>WENV183602149
OODJ01018820
151960
Bacteroidota
GGC
Ala
>WENV183601457
OODJ01001356
16220
Bacteroidota
GGA
Ser
>WENV183601332
OODJ01000871
127023
Bacteroidota
GGG
Pro
>WENV183600912
OODJ01000051
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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