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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183610184
OODS01000112
235102
Bacteroidota
CGT
Thr
>WENV183611084
OODS01045112
144657
Bacteroidota
CGG
Pro
>WENV183610257
OODS01000246
243025
Bacteroidota
CAT
Met
>WENV183610871
OODS01011239
338155
Bacteroidota
CTC
Glu
>WENV183610937
OODS01018833
339341
Bacteroidota
GGT
Thr
>WENV183610808
OODS01008127
338486
Bacteroidota
CAT
Met
>WENV183610891
OODS01013260
338486
Bacteroidota
CAT
Met
>WENV183610413
OODS01000795
415410
Bacteroidota
TTG
Gln
>WENV183610845
OODS01009676
59689
Bacteroidota
CAG
Leu
>WENV183610263
OODS01000262
80835
Bacteroidota
GTA
Tyr
>WENV183610731
OODS01004973
344692
Bacteroidota
GGT
Thr
>WENV183610794
OODS01007360
338124
Bacteroidota
CCG
Arg
>WENV183610236
OODS01000202
338124
Bacteroidota
CCG
Arg
>WENV183610248
OODS01000236
146800
Bacteroidota
>WENV183611037
OODS01034235
238121
Bacteroidota
CTT
Lys
>WENV183610652
OODS01003154
338132
Bacteroidota
GCA
Cys
>WENV183610171
OODS01000101
338132
Bacteroidota
GCA
Cys
>WENV183610774
OODS01006461
45423
Bacteroidota
TGA
Ser
>WENV183610240
OODS01000229
144656
Bacteroidota
GTG
His
>WENV183610456
OODS01001049
235207
Bacteroidota
CAT
Met
>WENV183610232
OODS01000198
235207
Bacteroidota
CAT
Met
>WENV183610181
OODS01000107
235207
Bacteroidota
CAT
Met
>WENV183610534
OODS01001631
144659
Bacteroidota
GTG
His
>WENV183611044
OODS01036791
235180
Bacteroidota
CCA
Trp
>WENV183610828
OODS01008783
235180
Bacteroidota
CCA
Trp
>WENV183610351
OODS01000497
80607
Bacteroidota
GTA
Tyr
>WENV183610104
OODS01000017
80607
Bacteroidota
GTA
Tyr
>WENV183610688
OODS01003819
113604
Bacteroidota
>WENV183610928
OODS01017049
80614
Bacteroidota
>WENV183610143
OODS01000069
154643
Bacteroidota
CAT
Met
>WENV183610421
OODS01000853
95559
Bacteroidota
TAG
Leu
>WENV183610641
OODS01002973
419272
Bacteroidota
CTG
Gln
>WENV183610165
OODS01000099
419272
Bacteroidota
CTG
Gln
>WENV183610395
OODS01000687
144655
Bacteroidota
GGC
Ala
>WENV183611000
OODS01027505
338164
Bacteroidota
TTC
Glu
>WENV183610662
OODS01003363
95875
Bacteroidota
TAG
Leu
>WENV183610782
OODS01006700
44852
Bacteroidota
TAA
Leu
>WENV183610138
OODS01000062
44852
Bacteroidota
TAA
Leu
>WENV183610887
OODS01012824
150485
Bacteroidota
GTT
Asn
>WENV183610752
OODS01005744
50727
Bacteroidota
TGA
Ser
>WENV183610309
OODS01000368
50727
Bacteroidota
TGA
Ser
>WENV183610613
OODS01002500
132360
Bacteroidota
GGG
Pro
>WENV183610164
OODS01000099
132360
Bacteroidota
GGG
Pro
>WENV183610096
OODS01000009
425638
Bacteroidota
CTG
Gln
>WENV183610089
OODS01000003
425638
Bacteroidota
CTG
Gln
>WENV183610166
OODS01000099
19317
Bacteroidota
GGA
Ser
>WENV183610449
OODS01000993
353927
Bacteroidota
TTC
Glu
>WENV183610803
OODS01007811
185921
Bacteroidota
GTC
Asp
>WENV183610870
OODS01011239
23696
Bacteroidota
GCT
Ser
>WENV183610315
OODS01000390
414426
Bacteroidota
CTG
Gln
>WENV183610801
OODS01007537
16224
Bacteroidota
GGA
Ser
>WENV183611019
OODS01031095
16220
Bacteroidota
GGA
Ser
>WENV183610663
OODS01003377
338125
Bacteroidota
CCT
Arg
>WENV183610259
OODS01000256
338125
Bacteroidota
CCT
Arg
>WENV183610795
OODS01007392
235129
Bacteroidota
GCC
Gly
>WENV183611025
OODS01031615
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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