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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183628299
OOGN01006658
308806
Bacteroidota
TCC
Gly
>WENV183628298
OOGN01006658
96418
Bacteroidota
GTA
Tyr
>WENV183628333
OOGN01010949
341187
Bacteroidota
TTG
Gln
>WENV183628374
OOGN01025748
127288
Bacteroidota
TGG
Pro
>WENV183628373
OOGN01025748
59930
Bacteroidota
GCT
Ser
>WENV183628375
OOGN01025748
176463
Bacteroidota
TCT
Arg
>WENV183628379
OOGN01026697
341598
Bacteroidota
GCC
Gly
>WENV183628397
OOGN01032663
81938
Bacteroidota
GAG
Leu
>WENV183628396
OOGN01032663
235936
Bacteroidota
TTT
Lys
>WENV183628446
OOGN01053450
238764
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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