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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
164 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183716579
PDWJ01000056
180199
Bacteroidota
CAT
Met
>WENV183716692
PDWJ01000136
200370
Bacteroidota
CAT
Met
>WENV183716773
PDWJ01000181
118400
Bacteroidota
TAG
Leu
>WENV183716774
PDWJ01000181
307577
Bacteroidota
>WENV183716894
PDWJ01000244
36295
Bacteroidota
GGA
Ser
>WENV183716927
PDWJ01000273
180199
Bacteroidota
CAT
Met
>WENV183717034
PDWJ01000392
176863
Bacteroidota
CAT
Met
>WENV183717112
PDWJ01000471
282131
Bacteroidota
TTG
Gln
>WENV183717113
PDWJ01000472
216338
Bacteroidota
GTG
His
>WENV183717415
PDWJ01000891
130793
Bacteroidota
TAG
Leu
>WENV183717433
PDWJ01000922
481284
Bacteroidota
CCA
Trp
>WENV183717435
PDWJ01000922
402171
Bacteroidota
TTC
Glu
>WENV183717554
PDWJ01001115
284409
Bacteroidota
CAT
Met
>WENV183717561
PDWJ01001125
284494
Bacteroidota
TCC
Gly
>WENV183717602
PDWJ01001202
399343
Bacteroidota
TTC
Glu
>WENV183717603
PDWJ01001202
399343
Bacteroidota
TTC
Glu
>WENV183717604
PDWJ01001202
399343
Bacteroidota
TTC
Glu
>WENV183717606
PDWJ01001208
170858
Bacteroidota
TGG
Pro
>WENV183717607
PDWJ01001208
170858
Bacteroidota
TGG
Pro
>WENV183717851
PDWJ01001748
235895
Bacteroidota
GTT
Asn
>WENV183717852
PDWJ01001748
235895
Bacteroidota
GTT
Asn
>WENV183717880
PDWJ01001853
299032
Bacteroidota
GCC
Gly
>WENV183717916
PDWJ01001957
179470
Bacteroidota
TCT
Arg
>WENV183717969
PDWJ01002079
399343
Bacteroidota
TTC
Glu
>WENV183718004
PDWJ01002156
284494
Bacteroidota
TCC
Gly
>WENV183718060
PDWJ01002287
179727
Bacteroidota
TGT
Thr
>WENV183718189
PDWJ01002731
178118
Bacteroidota
CAT
Met
>WENV183718256
PDWJ01003062
180199
Bacteroidota
CAT
Met
>WENV183718298
PDWJ01003246
284409
Bacteroidota
CAT
Met
>WENV183718382
PDWJ01003678
155808
Bacteroidota
TGG
Pro
>WENV183718428
PDWJ01003978
177083
Bacteroidota
TGT
Thr
>WENV183718504
PDWJ01004489
299032
Bacteroidota
GCC
Gly
>WENV183718597
PDWJ01005281
177901
Bacteroidota
GTT
Asn
>WENV183718645
PDWJ01005567
170858
Bacteroidota
TGG
Pro
>WENV183718658
PDWJ01005684
282131
Bacteroidota
TTG
Gln
>WENV183718710
PDWJ01005991
170858
Bacteroidota
TGG
Pro
>WENV183718711
PDWJ01005991
170858
Bacteroidota
TGG
Pro
>WENV183718767
PDWJ01006436
155807
Bacteroidota
GAC
Val
>WENV183718816
PDWJ01006678
180199
Bacteroidota
CAT
Met
>WENV183718828
PDWJ01006796
118416
Bacteroidota
TAG
Leu
>WENV183718867
PDWJ01007153
176863
Bacteroidota
CAT
Met
>WENV183718868
PDWJ01007177
193675
Bacteroidota
CAT
Met
>WENV183718947
PDWJ01008054
193718
Bacteroidota
GTC
Asp
>WENV183718951
PDWJ01008059
192365
Bacteroidota
GTT
Asn
>WENV183719011
PDWJ01008739
399343
Bacteroidota
TTC
Glu
>WENV183719039
PDWJ01009075
177901
Bacteroidota
GTT
Asn
>WENV183719060
PDWJ01009177
372845
Bacteroidota
CCA
Trp
>WENV183719114
PDWJ01009839
282369
Bacteroidota
TTT
Lys
>WENV183719153
PDWJ01010188
77278
Bacteroidota
TAA
Leu
>WENV183719213
PDWJ01010826
281130
Bacteroidota
GAA
Phe
>WENV183719255
PDWJ01011301
170858
Bacteroidota
TGG
Pro
>WENV183719297
PDWJ01011968
215303
Bacteroidota
GTC
Asp
>WENV183719298
PDWJ01011973
281190
Bacteroidota
CAT
Met
>WENV183719315
PDWJ01012199
156076
Bacteroidota
TAC
Val
>WENV183719329
PDWJ01012450
235895
Bacteroidota
GTT
Asn
>WENV183719371
PDWJ01013282
364431
Bacteroidota
TCC
Gly
>WENV183719385
PDWJ01013523
180199
Bacteroidota
CAT
Met
>WENV183719453
PDWJ01014360
180199
Bacteroidota
CAT
Met
>WENV183719538
PDWJ01015769
206043
Bacteroidota
GTC
Asp
>WENV183719601
PDWJ01017000
231584
Bacteroidota
TCT
Arg
>WENV183719675
PDWJ01018392
364431
Bacteroidota
TCC
Gly
>WENV183719677
PDWJ01018392
347386
Bacteroidota
CCA
Trp
>WENV183719687
PDWJ01018644
284239
Bacteroidota
TTT
Lys
>WENV183719704
PDWJ01018851
240785
Bacteroidota
GTC
Asp
>WENV183719745
PDWJ01019620
399343
Bacteroidota
TTC
Glu
>WENV183719755
PDWJ01019801
156068
Bacteroidota
TAC
Val
>WENV183719821
PDWJ01021066
177083
Bacteroidota
TGT
Thr
>WENV183719822
PDWJ01021066
117928
Bacteroidota
GTA
Tyr
>WENV183719823
PDWJ01021066
364431
Bacteroidota
TCC
Gly
>WENV183719824
PDWJ01021066
413853
Bacteroidota
GGT
Thr
>WENV183719910
PDWJ01022802
180199
Bacteroidota
CAT
Met
>WENV183719963
PDWJ01023961
235895
Bacteroidota
GTT
Asn
>WENV183720021
PDWJ01025017
197494
Bacteroidota
GTC
Asp
>WENV183720080
PDWJ01026042
488091
Bacteroidota
GCA
Cys
>WENV183720124
PDWJ01027057
183480
Bacteroidota
TGC
Ala
>WENV183720142
PDWJ01027399
170858
Bacteroidota
TGG
Pro
>WENV183720243
PDWJ01030244
240785
Bacteroidota
GTC
Asp
>WENV183720290
PDWJ01030975
235988
Bacteroidota
TGC
Ala
>WENV183720382
PDWJ01033125
182325
Bacteroidota
GAT
Ile
>WENV183720451
PDWJ01034435
170858
Bacteroidota
TGG
Pro
>WENV183720480
PDWJ01035261
188555
Bacteroidota
CAT
Met
>WENV183720483
PDWJ01035370
172063
Bacteroidota
TAC
Val
>WENV183720521
PDWJ01036187
235988
Bacteroidota
TGC
Ala
>WENV183720525
PDWJ01036295
170858
Bacteroidota
TGG
Pro
>WENV183720526
PDWJ01036295
170858
Bacteroidota
TGG
Pro
>WENV183720559
PDWJ01037519
215303
Bacteroidota
GTC
Asp
>WENV183720563
PDWJ01037676
24958
Bacteroidota
GGA
Ser
>WENV183720572
PDWJ01037939
284409
Bacteroidota
CAT
Met
>WENV183720580
PDWJ01038174
170858
Bacteroidota
TGG
Pro
>WENV183720619
PDWJ01039684
399343
Bacteroidota
TTC
Glu
>WENV183720624
PDWJ01039846
399343
Bacteroidota
TTC
Glu
>WENV183720625
PDWJ01039846
399343
Bacteroidota
TTC
Glu
>WENV183720626
PDWJ01039846
284239
Bacteroidota
TTT
Lys
>WENV183720658
PDWJ01040770
233847
Bacteroidota
TGC
Ala
>WENV183720674
PDWJ01041252
170858
Bacteroidota
TGG
Pro
>WENV183720700
PDWJ01042077
231584
Bacteroidota
TCT
Arg
>WENV183720715
PDWJ01042734
235895
Bacteroidota
GTT
Asn
>WENV183720739
PDWJ01043414
399343
Bacteroidota
TTC
Glu
>WENV183720760
PDWJ01044167
175904
Bacteroidota
CGG
Pro
>WENV183720771
PDWJ01044720
188555
Bacteroidota
CAT
Met
>WENV183720796
PDWJ01045556
170858
Bacteroidota
TGG
Pro
>WENV183720900
PDWJ01048879
180199
Bacteroidota
CAT
Met
>WENV183720903
PDWJ01048918
193675
Bacteroidota
CAT
Met
>WENV183720915
PDWJ01049201
170858
Bacteroidota
TGG
Pro
>WENV183720945
PDWJ01050168
282131
Bacteroidota
TTG
Gln
>WENV183720995
PDWJ01051353
240785
Bacteroidota
GTC
Asp
>WENV183721004
PDWJ01051889
176817
Bacteroidota
CAT
Met
>WENV183721039
PDWJ01053016
195088
Bacteroidota
CAT
Met
>WENV183721072
PDWJ01054342
334730
Bacteroidota
TTT
Lys
>WENV183721073
PDWJ01054385
361792
Bacteroidota
GAA
Phe
>WENV183721080
PDWJ01054791
399343
Bacteroidota
TTC
Glu
>WENV183721081
PDWJ01054791
399343
Bacteroidota
TTC
Glu
>WENV183721082
PDWJ01054791
399343
Bacteroidota
TTC
Glu
>WENV183721091
PDWJ01055111
180199
Bacteroidota
CAT
Met
>WENV183721110
PDWJ01055779
182234
Bacteroidota
TGT
Thr
>WENV183721134
PDWJ01056250
299032
Bacteroidota
GCC
Gly
>WENV183721137
PDWJ01056397
364431
Bacteroidota
TCC
Gly
>WENV183721181
PDWJ01057812
185161
Bacteroidota
GTT
Asn
>WENV183721183
PDWJ01057845
361792
Bacteroidota
GAA
Phe
>WENV183721185
PDWJ01058013
170858
Bacteroidota
TGG
Pro
>WENV183721216
PDWJ01059533
399200
Bacteroidota
CAT
Met
>WENV183721222
PDWJ01059654
235666
Bacteroidota
TCG
Arg
>WENV183721294
PDWJ01062859
233847
Bacteroidota
TGC
Ala
>WENV183721313
PDWJ01063902
361792
Bacteroidota
GAA
Phe
>WENV183721402
PDWJ01067652
240785
Bacteroidota
GTC
Asp
>WENV183721443
PDWJ01069786
180199
Bacteroidota
CAT
Met
>WENV183721484
PDWJ01071700
170858
Bacteroidota
TGG
Pro
>WENV183721537
PDWJ01074394
176817
Bacteroidota
CAT
Met
>WENV183721577
PDWJ01075830
482907
Bacteroidota
CTG
Gln
>WENV183721653
PDWJ01078865
400818
Bacteroidota
TTC
Glu
>WENV183721655
PDWJ01079247
400818
Bacteroidota
TTC
Glu
>WENV183721674
PDWJ01079860
408604
Bacteroidota
GGT
Thr
>WENV183721787
PDWJ01086406
177901
Bacteroidota
GTT
Asn
>WENV183721878
PDWJ01092166
436346
Bacteroidota
GGT
Thr
>WENV183721894
PDWJ01093206
188555
Bacteroidota
CAT
Met
>WENV183721907
PDWJ01093787
170858
Bacteroidota
TGG
Pro
>WENV183721946
PDWJ01096092
170858
Bacteroidota
TGG
Pro
>WENV183722000
PDWJ01099054
177901
Bacteroidota
GTT
Asn
>WENV183722046
PDWJ01101763
399343
Bacteroidota
TTC
Glu
>WENV183722086
PDWJ01104749
488091
Bacteroidota
GCA
Cys
>WENV183722137
PDWJ01107943
282369
Bacteroidota
TTT
Lys
>WENV183722163
PDWJ01109658
176602
Bacteroidota
TGC
Ala
>WENV183722170
PDWJ01110002
179905
Bacteroidota
GTT
Asn
>WENV183722204
PDWJ01111459
118089
Bacteroidota
TAG
Leu
>WENV183722216
PDWJ01112411
180199
Bacteroidota
CAT
Met
>WENV183722253
PDWJ01115304
231584
Bacteroidota
TCT
Arg
>WENV183722291
PDWJ01116811
486363
Bacteroidota
TTG
Gln
>WENV183722292
PDWJ01117021
486363
Bacteroidota
TTG
Gln
>WENV183722306
PDWJ01118607
399343
Bacteroidota
TTC
Glu
>WENV183722307
PDWJ01118607
399343
Bacteroidota
TTC
Glu
>WENV183722308
PDWJ01118607
399343
Bacteroidota
TTC
Glu
>WENV183722380
PDWJ01123903
235895
Bacteroidota
GTT
Asn
>WENV183722388
PDWJ01124328
172063
Bacteroidota
TAC
Val
>WENV183722413
PDWJ01126861
235895
Bacteroidota
GTT
Asn
>WENV183722430
PDWJ01128879
177083
Bacteroidota
TGT
Thr
>WENV183722431
PDWJ01129163
182234
Bacteroidota
TGT
Thr
>WENV183722453
PDWJ01130420
235895
Bacteroidota
GTT
Asn
>WENV183722481
PDWJ01132611
399343
Bacteroidota
TTC
Glu
>WENV183722482
PDWJ01132611
399343
Bacteroidota
TTC
Glu
>WENV183722502
PDWJ01134839
399200
Bacteroidota
CAT
Met
>WENV183722572
PDWJ01139224
233847
Bacteroidota
TGC
Ala
>WENV183722645
PDWJ01145371
299032
Bacteroidota
GCC
Gly
>WENV183722651
PDWJ01145641
215303
Bacteroidota
GTC
Asp
>WENV183722676
PDWJ01147467
240785
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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