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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183617450
OOEG01000107
166654
Gammaproteobacteria
GAC
Val
>WENV183617574
OOEG01009876
281920
Gammaproteobacteria
CCA
Trp
>WENV183617439
OOEG01000016
147053
Gammaproteobacteria
GTT
Asn
>WENV183617453
OOEG01000151
190137
Gammaproteobacteria
CAT
Met
>WENV183617459
OOEG01000288
191831
Gammaproteobacteria
ACG
Arg
>WENV183617460
OOEG01000288
191831
Gammaproteobacteria
ACG
Arg
>WENV183617492
OOEG01001659
301232
Gammaproteobacteria
TTC
Glu
>WENV183617643
OOEG01029096
349095
Gammaproteobacteria
TCC
Gly
>WENV183617576
OOEG01010001
412799
Gammaproteobacteria
GCA
Cys
>WENV183617705
OOEG01054202
59155
Gammaproteobacteria
TAA
Leu
>WENV183617606
OOEG01014628
289927
Gammaproteobacteria
GAA
Phe
>WENV183617774
OOEG01095681
202944
Gammaproteobacteria
TGG
Pro
>WENV183617539
OOEG01005836
199268
Gammaproteobacteria
ACG
Arg
>WENV183617888
OOEG01197994
277901
Gammaproteobacteria
TGT
Thr
>WENV183617465
OOEG01000515
277901
Gammaproteobacteria
TGT
Thr
>WENV183617451
OOEG01000134
277901
Gammaproteobacteria
TGT
Thr
>WENV183617585
OOEG01011319
237412
Gammaproteobacteria
TAC
Val
>WENV183617724
OOEG01062660
235886
Gammaproteobacteria
TTC
Glu
>WENV183617704
OOEG01054202
412217
Gammaproteobacteria
GCA
Cys
>WENV183617835
OOEG01142483
243921
Gammaproteobacteria
TTT
Lys
>WENV183617809
OOEG01119194
16460
Gammaproteobacteria
TGA
Ser
>WENV183617660
OOEG01035310
175964
Gammaproteobacteria
CAT
Met
>WENV183617471
OOEG01000560
150648
Gammaproteobacteria
TGG
Pro
>WENV183617438
OOEG01000010
150648
Gammaproteobacteria
TGG
Pro
>WENV183617519
OOEG01004036
113872
Gammaproteobacteria
GTA
Tyr
>WENV183617534
OOEG01005414
59485
Gammaproteobacteria
CAG
Leu
>WENV183617577
OOEG01010001
59979
Gammaproteobacteria
TAA
Leu
>WENV183617758
OOEG01086515
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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