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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183621379
OOFU01000008
237766
Gammaproteobacteria
TAC
Val
>WENV183621380
OOFU01000008
237766
Gammaproteobacteria
TAC
Val
>WENV183621387
OOFU01000096
166654
Gammaproteobacteria
GAC
Val
>WENV183621390
OOFU01000103
150648
Gammaproteobacteria
TGG
Pro
>WENV183621399
OOFU01000174
281920
Gammaproteobacteria
CCA
Trp
>WENV183621402
OOFU01000244
149036
Gammaproteobacteria
CCA
Trp
>WENV183621403
OOFU01000283
10850
Gammaproteobacteria
TGA
Ser
>WENV183621421
OOFU01000622
148442
Gammaproteobacteria
ACG
Arg
>WENV183621420
OOFU01000622
148442
Gammaproteobacteria
ACG
Arg
>WENV183621422
OOFU01000642
262546
Gammaproteobacteria
TGC
Ala
>WENV183621425
OOFU01000663
412799
Gammaproteobacteria
GCA
Cys
>WENV183621426
OOFU01000663
59979
Gammaproteobacteria
TAA
Leu
>WENV183621434
OOFU01000806
277901
Gammaproteobacteria
TGT
Thr
>WENV183621441
OOFU01000841
277901
Gammaproteobacteria
TGT
Thr
>WENV183621463
OOFU01001799
113872
Gammaproteobacteria
GTA
Tyr
>WENV183621471
OOFU01002078
237412
Gammaproteobacteria
TAC
Val
>WENV183621473
OOFU01002151
150648
Gammaproteobacteria
TGG
Pro
>WENV183621505
OOFU01003886
147053
Gammaproteobacteria
GTT
Asn
>WENV183621506
OOFU01003886
147053
Gammaproteobacteria
GTT
Asn
>WENV183621530
OOFU01004879
269248
Gammaproteobacteria
CCA
Trp
>WENV183621541
OOFU01005551
237766
Gammaproteobacteria
TAC
Val
>WENV183621542
OOFU01005551
237766
Gammaproteobacteria
TAC
Val
>WENV183621629
OOFU01019177
277196
Gammaproteobacteria
GAA
Phe
>WENV183621638
OOFU01020771
149578
Gammaproteobacteria
ACG
Arg
>WENV183621692
OOFU01031475
115067
Gammaproteobacteria
GTA
Tyr
>WENV183621691
OOFU01031475
240619
Gammaproteobacteria
TGT
Thr
>WENV183621793
OOFU01061208
411735
Gammaproteobacteria
GCA
Cys
>WENV183621802
OOFU01065372
149036
Gammaproteobacteria
CCA
Trp
>WENV183621815
OOFU01070275
95613
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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