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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183624658
OOGE01000082
301352
Gammaproteobacteria
TGC
Ala
>WENV183624664
OOGE01000145
277901
Gammaproteobacteria
TGT
Thr
>WENV183624666
OOGE01000343
277901
Gammaproteobacteria
TGT
Thr
>WENV183624685
OOGE01000738
147053
Gammaproteobacteria
GTT
Asn
>WENV183624693
OOGE01001090
113872
Gammaproteobacteria
GTA
Tyr
>WENV183624706
OOGE01001506
191831
Gammaproteobacteria
ACG
Arg
>WENV183624713
OOGE01002379
277725
Gammaproteobacteria
TAC
Val
>WENV183624734
OOGE01004584
279385
Gammaproteobacteria
TTT
Lys
>WENV183624736
OOGE01004685
273942
Gammaproteobacteria
GCC
Gly
>WENV183624759
OOGE01007043
45345
Gammaproteobacteria
GGA
Ser
>WENV183624778
OOGE01008135
166654
Gammaproteobacteria
GAC
Val
>WENV183624781
OOGE01008685
289927
Gammaproteobacteria
GAA
Phe
>WENV183624791
OOGE01010118
16840
Gammaproteobacteria
GGA
Ser
>WENV183624804
OOGE01011416
150648
Gammaproteobacteria
TGG
Pro
>WENV183624832
OOGE01017306
235886
Gammaproteobacteria
TTC
Glu
>WENV183624836
OOGE01017407
288001
Gammaproteobacteria
TTG
Gln
>WENV183624837
OOGE01017685
301232
Gammaproteobacteria
TTC
Glu
>WENV183624851
OOGE01020096
190137
Gammaproteobacteria
CAT
Met
>WENV183624876
OOGE01025632
237766
Gammaproteobacteria
TAC
Val
>WENV183624877
OOGE01025632
237766
Gammaproteobacteria
TAC
Val
>WENV183624981
OOGE01053919
412799
Gammaproteobacteria
GCA
Cys
>WENV183624982
OOGE01053919
59979
Gammaproteobacteria
TAA
Leu
>WENV183625001
OOGE01060832
248041
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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