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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183625166
OOGF01002192
312287
Gammaproteobacteria
TGT
Thr
>WENV183625182
OOGF01003009
248041
Gammaproteobacteria
GGC
Ala
>WENV183625090
OOGF01000546
149578
Gammaproteobacteria
ACG
Arg
>WENV183625277
OOGF01008773
236366
Gammaproteobacteria
GTG
His
>WENV183625109
OOGF01000768
322642
Gammaproteobacteria
GGT
Thr
>WENV183625082
OOGF01000423
247974
Gammaproteobacteria
CCA
Trp
>WENV183625397
OOGF01023202
294663
Gammaproteobacteria
TTC
Glu
>WENV183625228
OOGF01005780
294663
Gammaproteobacteria
TTC
Glu
>WENV183625197
OOGF01003581
294663
Gammaproteobacteria
TTC
Glu
>WENV183625394
OOGF01023054
173040
Gammaproteobacteria
GAC
Val
>WENV183625126
OOGF01000927
411842
Gammaproteobacteria
GCA
Cys
>WENV183625061
OOGF01000187
149661
Gammaproteobacteria
CAT
Met
>WENV183625106
OOGF01000768
237421
Gammaproteobacteria
TGT
Thr
>WENV183625130
OOGF01001090
16840
Gammaproteobacteria
GGA
Ser
>WENV183625113
OOGF01000769
240536
Gammaproteobacteria
TTT
Lys
>WENV183625112
OOGF01000769
240536
Gammaproteobacteria
TTT
Lys
>WENV183625069
OOGF01000263
288517
Gammaproteobacteria
TGT
Thr
>WENV183625324
OOGF01012082
198797
Gammaproteobacteria
TGG
Pro
>WENV183625125
OOGF01000927
270352
Gammaproteobacteria
GCC
Gly
>WENV183625370
OOGF01019080
190809
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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