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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183625881
OOGH01000001
288517
Gammaproteobacteria
TGT
Thr
>WENV183625892
OOGH01000042
247974
Gammaproteobacteria
CCA
Trp
>WENV183625896
OOGH01000046
312287
Gammaproteobacteria
TGT
Thr
>WENV183625908
OOGH01000076
411842
Gammaproteobacteria
GCA
Cys
>WENV183625907
OOGH01000076
270352
Gammaproteobacteria
GCC
Gly
>WENV183625918
OOGH01000153
236366
Gammaproteobacteria
GTG
His
>WENV183625922
OOGH01000181
248041
Gammaproteobacteria
GGC
Ala
>WENV183625957
OOGH01000696
245770
Gammaproteobacteria
TTT
Lys
>WENV183626055
OOGH01006993
237421
Gammaproteobacteria
TGT
Thr
>WENV183626114
OOGH01014997
198797
Gammaproteobacteria
TGG
Pro
>WENV183626160
OOGH01021615
294663
Gammaproteobacteria
TTC
Glu
>WENV183626205
OOGH01031692
190809
Gammaproteobacteria
GGG
Pro
>WENV183626219
OOGH01037424
147049
Gammaproteobacteria
GGG
Pro
>WENV183626246
OOGH01045610
240536
Gammaproteobacteria
TTT
Lys
>WENV183626255
OOGH01047775
24366
Gammaproteobacteria
GGA
Ser
>WENV183626265
OOGH01049992
245151
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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