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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183684996
ORMF010786505
428943
Gammaproteobacteria
>WENV183684208
ORMF010675658
181949
Gammaproteobacteria
CAT
Met
>WENV183695239
ORMF012356958
411593
Gammaproteobacteria
CCC
Gly
>WENV183682884
ORMF010500879
190084
Gammaproteobacteria
CCT
Arg
>WENV183693598
ORMF012107142
44872
Gammaproteobacteria
GGA
Ser
>WENV183679303
ORMF010043101
311863
Gammaproteobacteria
GGC
Ala
>WENV183694048
ORMF012177799
322642
Gammaproteobacteria
GGT
Thr
>WENV183683867
ORMF010630969
112351
Gammaproteobacteria
GTA
Tyr
>WENV183682094
ORMF010396841
278793
Gammaproteobacteria
GTG
His
>WENV183681030
ORMF010254298
237412
Gammaproteobacteria
TAC
Val
>WENV183684155
ORMF010669317
236013
Gammaproteobacteria
TGC
Ala
>WENV183686747
ORMF011045102
235342
Gammaproteobacteria
TGC
Ala
>WENV183685484
ORMF010855904
144816
Gammaproteobacteria
TGG
Pro
>WENV183693267
ORMF012052929
186449
Gammaproteobacteria
TGG
Pro
>WENV183689269
ORMF011413942
186449
Gammaproteobacteria
TGG
Pro
>WENV183682092
ORMF010396841
186449
Gammaproteobacteria
TGG
Pro
>WENV183684316
ORMF010693523
399066
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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