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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170096331
CEAK01013450
154983
Bacteroidota
GTA
Tyr
>WENV170096352
CEAK01014124
86857
Bacteroidota
TAA
Leu
>WENV170096246
CEAK01009902
779477
Bacteroidota
TTG
Gln
>WENV170096583
CEAK01023171
87218
Bacteroidota
TGA
Ser
>WENV170096355
CEAK01014440
270542
Bacteroidota
CAT
Met
>WENV170096356
CEAK01014440
270542
Bacteroidota
CAT
Met
>WENV170096742
CEAK01030980
271143
Bacteroidota
TGC
Ala
>WENV170096819
CEAK01034258
270412
Bacteroidota
GTT
Asn
>WENV170096820
CEAK01034258
270412
Bacteroidota
GTT
Asn
>WENV170096821
CEAK01034258
270412
Bacteroidota
GTT
Asn
>WENV170096151
CEAK01005807
451354
Bacteroidota
TTT
Lys
>WENV170096578
CEAK01022997
451354
Bacteroidota
TTT
Lys
>WENV170096668
CEAK01027977
451354
Bacteroidota
TTT
Lys
>WENV170096855
CEAK01035608
654770
Bacteroidota
GGT
Thr
>WENV170096594
CEAK01023676
113533
Bacteroidota
CAG
Leu
>WENV170096123
CEAK01004892
779388
Bacteroidota
CTG
Gln
>WENV170096124
CEAK01004892
779388
Bacteroidota
CTG
Gln
>WENV170096299
CEAK01011886
779388
Bacteroidota
CTG
Gln
>WENV170096300
CEAK01011886
779388
Bacteroidota
CTG
Gln
>WENV170096301
CEAK01011886
779388
Bacteroidota
CTG
Gln
>WENV170096071
CEAK01002270
451478
Bacteroidota
TTT
Lys
>WENV170096136
CEAK01005457
451478
Bacteroidota
TTT
Lys
>WENV170096509
CEAK01019987
653389
Bacteroidota
GGT
Thr
>WENV170096857
CEAK01035608
658239
Bacteroidota
CTC
Glu
>WENV170096796
CEAK01033339
30311
Bacteroidota
GGA
Ser
>WENV170096491
CEAK01019351
87355
Bacteroidota
TGA
Ser
>WENV170096746
CEAK01031317
87355
Bacteroidota
TGA
Ser
>WENV170096800
CEAK01033564
87355
Bacteroidota
TGA
Ser
>WENV170096576
CEAK01022997
30278
Bacteroidota
GGA
Ser
>WENV170096670
CEAK01027977
30278
Bacteroidota
GGA
Ser
>WENV170096586
CEAK01023422
112241
Bacteroidota
CAA
Leu
>WENV170096380
CEAK01015026
218000
Bacteroidota
CAG
Leu
>WENV170096383
CEAK01015026
218000
Bacteroidota
CAG
Leu
>WENV170096386
CEAK01015026
218000
Bacteroidota
CAG
Leu
>WENV170096452
CEAK01017105
218000
Bacteroidota
CAG
Leu
>WENV170096544
CEAK01021204
270492
Bacteroidota
GTG
His
>WENV170096046
CEAK01002045
451360
Bacteroidota
CGT
Thr
>WENV170096617
CEAK01025105
458644
Bacteroidota
CCC
Gly
>WENV170096653
CEAK01026990
458644
Bacteroidota
CCC
Gly
>WENV170096017
CEAK01000595
153684
Bacteroidota
GTA
Tyr
>WENV170096025
CEAK01001199
153684
Bacteroidota
GTA
Tyr
>WENV170096823
CEAK01034258
153684
Bacteroidota
GTA
Tyr
>WENV170096108
CEAK01004281
783463
Bacteroidota
CTG
Gln
>WENV170096748
CEAK01031322
180313
Bacteroidota
TAG
Leu
>WENV170096015
CEAK01000595
86859
Bacteroidota
TGA
Ser
>WENV170096289
CEAK01011487
86859
Bacteroidota
TGA
Ser
>WENV170096712
CEAK01029132
86859
Bacteroidota
TGA
Ser
>WENV170096713
CEAK01029132
86859
Bacteroidota
TGA
Ser
>WENV170096377
CEAK01014756
270514
Bacteroidota
GTT
Asn
>WENV170096458
CEAK01017337
270514
Bacteroidota
GTT
Asn
>WENV170096272
CEAK01010564
273900
Bacteroidota
GTC
Asp
>WENV170096273
CEAK01010564
273900
Bacteroidota
GTC
Asp
>WENV170096465
CEAK01017709
451389
Bacteroidota
GCC
Gly
>WENV170096593
CEAK01023676
451389
Bacteroidota
GCC
Gly
>WENV170096701
CEAK01028849
451389
Bacteroidota
GCC
Gly
>WENV170096703
CEAK01028849
451389
Bacteroidota
GCC
Gly
>WENV170096221
CEAK01008990
179905
Bacteroidota
TAG
Leu
>WENV170096527
CEAK01020683
660446
Bacteroidota
CCT
Arg
>WENV170096059
CEAK01002050
270418
Bacteroidota
GGC
Ala
>WENV170096613
CEAK01024854
270418
Bacteroidota
GGC
Ala
>WENV170096827
CEAK01034260
656020
Bacteroidota
>WENV170096686
CEAK01028251
72680
Bacteroidota
TAA
Leu
>WENV170096547
CEAK01021211
277204
Bacteroidota
GTC
Asp
>WENV170096564
CEAK01022732
240600
Bacteroidota
GGG
Pro
>WENV170096577
CEAK01022997
240600
Bacteroidota
GGG
Pro
>WENV170096667
CEAK01027977
240600
Bacteroidota
GGG
Pro
>WENV170096849
CEAK01035327
240600
Bacteroidota
GGG
Pro
>WENV170096080
CEAK01002632
779393
Bacteroidota
TTG
Gln
>WENV170096210
CEAK01008399
779393
Bacteroidota
TTG
Gln
>WENV170096432
CEAK01016278
779393
Bacteroidota
TTG
Gln
>WENV170096013
CEAK01000478
270494
Bacteroidota
CGG
Pro
>WENV170096088
CEAK01003223
270494
Bacteroidota
CGG
Pro
>WENV170096213
CEAK01008567
270494
Bacteroidota
CGG
Pro
>WENV170096575
CEAK01022997
782347
Bacteroidota
CTG
Gln
>WENV170096669
CEAK01027977
782347
Bacteroidota
CTG
Gln
>WENV170096363
CEAK01014451
270491
Bacteroidota
GGC
Ala
>WENV170096850
CEAK01035550
241460
Bacteroidota
TAC
Val
>WENV170096851
CEAK01035550
241460
Bacteroidota
TAC
Val
>WENV170096852
CEAK01035550
241460
Bacteroidota
TAC
Val
>WENV170096813
CEAK01033998
451484
Bacteroidota
CAT
Met
>WENV170096350
CEAK01014124
653343
Bacteroidota
CCT
Arg
>WENV170096643
CEAK01026456
653343
Bacteroidota
CCT
Arg
>WENV170096255
CEAK01010225
30567
Bacteroidota
GGA
Ser
>WENV170096784
CEAK01032535
30567
Bacteroidota
GGA
Ser
>WENV170096528
CEAK01020683
653388
Bacteroidota
TTC
Glu
>WENV170096529
CEAK01020683
653388
Bacteroidota
TTC
Glu
>WENV170096116
CEAK01004586
463028
Bacteroidota
CAT
Met
>WENV170096818
CEAK01034109
463028
Bacteroidota
CAT
Met
>WENV170096079
CEAK01002619
653774
Bacteroidota
CAT
Met
>WENV170096086
CEAK01002837
653774
Bacteroidota
CAT
Met
>WENV170096481
CEAK01019170
653774
Bacteroidota
CAT
Met
>WENV170096731
CEAK01030490
653774
Bacteroidota
CAT
Met
>WENV170096135
CEAK01005456
153692
Bacteroidota
GTA
Tyr
>WENV170096828
CEAK01034269
153692
Bacteroidota
GTA
Tyr
>WENV170096854
CEAK01035608
153692
Bacteroidota
GTA
Tyr
>WENV170096629
CEAK01025440
780665
Bacteroidota
TTG
Gln
>WENV170096129
CEAK01005241
270851
Bacteroidota
TCT
Arg
>WENV170096462
CEAK01017417
270851
Bacteroidota
TCT
Arg
>WENV170096466
CEAK01017883
270851
Bacteroidota
TCT
Arg
>WENV170096545
CEAK01021204
30277
Bacteroidota
GGA
Ser
>WENV170096137
CEAK01005460
180504
Bacteroidota
CAA
Leu
>WENV170096325
CEAK01012935
653377
Bacteroidota
CTC
Glu
>WENV170096144
CEAK01005475
653350
Bacteroidota
GCA
Cys
>WENV170096198
CEAK01008093
653350
Bacteroidota
GCA
Cys
>WENV170096416
CEAK01015697
653350
Bacteroidota
GCA
Cys
>WENV170096089
CEAK01003223
451452
Bacteroidota
CCA
Trp
>WENV170096709
CEAK01029081
270497
Bacteroidota
GTG
His
>WENV170096710
CEAK01029081
270497
Bacteroidota
GTG
His
>WENV170096240
CEAK01009856
660260
Bacteroidota
CTC
Glu
>WENV170096241
CEAK01009856
660260
Bacteroidota
CTC
Glu
>WENV170096358
CEAK01014440
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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