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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170136207
CENV01011528
486408
Gammaproteobacteria
GTT
Asn
>WENV170136196
CENV01010998
457453
Gammaproteobacteria
TTT
Lys
>WENV170136430
CENV01033759
275465
Gammaproteobacteria
GAC
Val
>WENV170136144
CENV01005296
454974
Gammaproteobacteria
TAC
Val
>WENV170136829
CENV01081471
271464
Gammaproteobacteria
TGG
Pro
>WENV170136847
CENV01084461
273856
Gammaproteobacteria
GAC
Val
>WENV170136848
CENV01084461
273856
Gammaproteobacteria
GAC
Val
>ENV002565
AY934179
270982
Gammaproteobacteria
GAT
Ile
>ENV000889
AY033301
270982
Gammaproteobacteria
GAT
Ile
>ENV000954
AY235676
270982
Gammaproteobacteria
GAT
Ile
>ENV000956
AY235677
270982
Gammaproteobacteria
GAT
Ile
>ENV000958
AY235678
270982
Gammaproteobacteria
GAT
Ile
>ENV000960
AY235679
270982
Gammaproteobacteria
GAT
Ile
>ENV000962
AY235680
270982
Gammaproteobacteria
GAT
Ile
>ENV001041
AY458646
270982
Gammaproteobacteria
GAT
Ile
>ENV002494
AY934140
270982
Gammaproteobacteria
GAT
Ile
>ENV002499
AY934143
270982
Gammaproteobacteria
GAT
Ile
>ENV002503
AY934145
270982
Gammaproteobacteria
GAT
Ile
>ENV002516
AY934152
270982
Gammaproteobacteria
GAT
Ile
>ENV002526
AY934158
270982
Gammaproteobacteria
GAT
Ile
>ENV002528
AY934159
270982
Gammaproteobacteria
GAT
Ile
>ENV002530
AY934160
270982
Gammaproteobacteria
GAT
Ile
>ENV002532
AY934161
270982
Gammaproteobacteria
GAT
Ile
>ENV002548
AY934170
270982
Gammaproteobacteria
GAT
Ile
>ENV002552
AY934172
270982
Gammaproteobacteria
GAT
Ile
>ENV002555
AY934174
270982
Gammaproteobacteria
GAT
Ile
>ENV002561
AY934177
270982
Gammaproteobacteria
GAT
Ile
>ENV002929
AY934376
270982
Gammaproteobacteria
GAT
Ile
>ENV002980
AY934405
270982
Gammaproteobacteria
GAT
Ile
>ENV002987
AY934409
270982
Gammaproteobacteria
GAT
Ile
>ENV003003
AY934417
270982
Gammaproteobacteria
GAT
Ile
>ENV003009
AY934420
270982
Gammaproteobacteria
GAT
Ile
>ENV003014
AY934423
270982
Gammaproteobacteria
GAT
Ile
>ENV003205
DQ009126
270982
Gammaproteobacteria
GAT
Ile
>ENV003207
DQ009127
270982
Gammaproteobacteria
GAT
Ile
>ENV003211
DQ009129
270982
Gammaproteobacteria
GAT
Ile
>ENV003213
DQ009130
270982
Gammaproteobacteria
GAT
Ile
>ENV003224
DQ009136
270982
Gammaproteobacteria
GAT
Ile
>ENV003643
DQ009372
270982
Gammaproteobacteria
GAT
Ile
>ENV003645
DQ009373
270982
Gammaproteobacteria
GAT
Ile
>ENV003717
DQ009424
270982
Gammaproteobacteria
GAT
Ile
>ENV003791
DQ009465
270982
Gammaproteobacteria
GAT
Ile
>ENV003794
DQ009467
270982
Gammaproteobacteria
GAT
Ile
>WENV170136590
CENV01052183
270982
Gammaproteobacteria
GAT
Ile
>ENV002567
AY934180
270982
Gammaproteobacteria
GAT
Ile
>ENV002865
AY934339
270982
Gammaproteobacteria
GAT
Ile
>ENV002879
AY934347
270982
Gammaproteobacteria
GAT
Ile
>ENV002889
AY934352
270982
Gammaproteobacteria
GAT
Ile
>ENV002911
AY934367
270982
Gammaproteobacteria
GAT
Ile
>ENV002913
AY934368
270982
Gammaproteobacteria
GAT
Ile
>WENV170136424
CENV01032199
780242
Gammaproteobacteria
GCA
Cys
>WENV170136255
CENV01016741
451916
Gammaproteobacteria
TTC
Glu
>WENV170136750
CENV01070069
452605
Gammaproteobacteria
GGC
Ala
>WENV170136169
CENV01008716
456706
Gammaproteobacteria
TGT
Thr
>WENV170136937
CENV01117327
779641
Gammaproteobacteria
TCC
Gly
>WENV170136619
CENV01054300
86880
Gammaproteobacteria
GGA
Ser
>WENV170136574
CENV01050430
45751
Gammaproteobacteria
GGA
Ser
>WENV170136237
CENV01014832
274864
Gammaproteobacteria
ACG
Arg
>WENV170136238
CENV01014832
274864
Gammaproteobacteria
ACG
Arg
>WENV170136215
CENV01012499
474720
Gammaproteobacteria
TGC
Ala
>WENV170136805
CENV01078315
273847
Gammaproteobacteria
CCT
Arg
>WENV170136414
CENV01031169
273857
Gammaproteobacteria
TGG
Pro
>WENV170136179
CENV01009133
273756
Gammaproteobacteria
TGG
Pro
>WENV170136178
CENV01009133
454972
Gammaproteobacteria
GTG
His
>WENV170136399
CENV01030017
459789
Gammaproteobacteria
GTT
Asn
>WENV170136165
CENV01007936
180499
Gammaproteobacteria
GTA
Tyr
>WENV170136130
CENV01004280
657785
Gammaproteobacteria
TTG
Gln
>WENV170136442
CENV01035198
780642
Gammaproteobacteria
GCA
Cys
>WENV170136239
CENV01014832
273924
Gammaproteobacteria
ACG
Arg
>WENV170136667
CENV01058866
452332
Gammaproteobacteria
GTG
His
>WENV170136816
CENV01079267
656404
Gammaproteobacteria
TTG
Gln
>WENV170136277
CENV01019246
282413
Gammaproteobacteria
ACG
Arg
>WENV170136542
CENV01046805
655197
Gammaproteobacteria
TTG
Gln
>WENV170136152
CENV01006422
46215
Gammaproteobacteria
GCT
Ser
>WENV170136668
CENV01058866
180005
Gammaproteobacteria
TAG
Leu
>WENV170136221
CENV01013277
452412
Gammaproteobacteria
GCC
Gly
>WENV170136470
CENV01038152
452412
Gammaproteobacteria
GCC
Gly
>WENV170136451
CENV01035961
180498
Gammaproteobacteria
TAG
Leu
>WENV170136129
CENV01004280
454424
Gammaproteobacteria
GAA
Phe
>WENV170136302
CENV01020512
112306
Gammaproteobacteria
CAG
Leu
>WENV170136212
CENV01012447
780101
Gammaproteobacteria
TCC
Gly
>WENV170136145
CENV01005296
273869
Gammaproteobacteria
GTT
Asn
>WENV170136782
CENV01074420
271200
Gammaproteobacteria
CAT
Met
>WENV170136153
CENV01006422
271456
Gammaproteobacteria
ACG
Arg
>WENV170136698
CENV01062951
458525
Gammaproteobacteria
TAC
Val
>WENV170136598
CENV01052387
271616
Gammaproteobacteria
CAT
Met
>WENV170136333
CENV01023469
454969
Gammaproteobacteria
GTT
Asn
>WENV170136360
CENV01026505
454969
Gammaproteobacteria
GTT
Asn
>WENV170136640
CENV01057358
459479
Gammaproteobacteria
TTC
Glu
>WENV170136798
CENV01076243
271613
Gammaproteobacteria
GTC
Asp
>WENV170136869
CENV01086823
271613
Gammaproteobacteria
GTC
Asp
>WENV170136411
CENV01030884
452410
Gammaproteobacteria
TAC
Val
>WENV170136803
CENV01077844
180500
Gammaproteobacteria
TAG
Leu
>WENV170136272
CENV01018850
112884
Gammaproteobacteria
CAG
Leu
>WENV170136477
CENV01039316
112884
Gammaproteobacteria
CAG
Leu
>WENV170136427
CENV01032590
30354
Gammaproteobacteria
TGA
Ser
>WENV170136213
CENV01012447
655194
Gammaproteobacteria
GGT
Thr
>WENV170136938
CENV01117327
655603
Gammaproteobacteria
GGT
Thr
>WENV170136861
CENV01086406
48884
Gammaproteobacteria
CGA
Ser
>WENV170136732
CENV01067097
452407
Gammaproteobacteria
GAA
Phe
>WENV170136103
CENV01001745
271253
Gammaproteobacteria
CAT
Met
>WENV170136389
CENV01028762
271253
Gammaproteobacteria
CAT
Met
>WENV170136559
CENV01047966
271253
Gammaproteobacteria
CAT
Met
>WENV170136797
CENV01076176
112363
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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