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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170471738
CEVG01101186
273863
Gammaproteobacteria
GGG
Pro
>WENV170471122
CEVG01038424
274150
Gammaproteobacteria
CAT
Met
>WENV170471996
CEVG01128296
284350
Gammaproteobacteria
TCT
Arg
>WENV170471123
CEVG01038427
274166
Gammaproteobacteria
GAC
Val
>WENV170471697
CEVG01097467
273856
Gammaproteobacteria
GAC
Val
>WENV170471225
CEVG01048214
270982
Gammaproteobacteria
GAT
Ile
>WENV170471634
CEVG01089944
270982
Gammaproteobacteria
GAT
Ile
>WENV170471246
CEVG01050139
276971
Gammaproteobacteria
ACG
Arg
>WENV170471901
CEVG01119853
180499
Gammaproteobacteria
GTA
Tyr
>WENV170471227
CEVG01048258
273853
Gammaproteobacteria
CAT
Met
>WENV170471627
CEVG01089433
87214
Gammaproteobacteria
GGA
Ser
>WENV170470929
CEVG01021611
460378
Gammaproteobacteria
TAC
Val
>WENV170472734
CEVG01283643
271460
Gammaproteobacteria
CGG
Pro
>WENV170471811
CEVG01109011
456510
Gammaproteobacteria
GGC
Ala
>WENV170471767
CEVG01103954
180498
Gammaproteobacteria
TAG
Leu
>WENV170470989
CEVG01026257
275658
Gammaproteobacteria
TGG
Pro
>WENV170471345
CEVG01059950
780101
Gammaproteobacteria
TCC
Gly
>WENV170472839
CEVG01312876
113485
Gammaproteobacteria
CAA
Leu
>WENV170472470
CEVG01174360
452881
Gammaproteobacteria
TGT
Thr
>WENV170471865
CEVG01115819
112814
Gammaproteobacteria
GAG
Leu
>WENV170471346
CEVG01059950
655194
Gammaproteobacteria
GGT
Thr
>WENV170472004
CEVG01128959
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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