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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170893330
MDTD01050348
278884
Bacteroidota
GGC
Ala
>WENV170896374
MDTD01094519
278884
Bacteroidota
GGC
Ala
>WENV170895774
MDTD01084994
452308
Bacteroidota
GCC
Gly
>WENV170897244
MDTD01108300
273835
Bacteroidota
GTT
Asn
>WENV170900496
MDTD01155150
273835
Bacteroidota
GTT
Asn
>WENV170902801
MDTD01191652
273835
Bacteroidota
GTT
Asn
>WENV170896883
MDTD01102505
273594
Bacteroidota
CAT
Met
>WENV170898550
MDTD01127663
653934
Bacteroidota
TTC
Glu
>WENV170896941
MDTD01103368
180132
Bacteroidota
GTA
Tyr
>WENV170892522
MDTD01039311
456728
Bacteroidota
CAT
Met
>WENV170900997
MDTD01163000
456728
Bacteroidota
CAT
Met
>WENV170903297
MDTD01199491
456728
Bacteroidota
CAT
Met
>WENV170892183
MDTD01034890
271717
Bacteroidota
GTC
Asp
>WENV170896438
MDTD01095448
271717
Bacteroidota
GTC
Asp
>WENV170898729
MDTD01130331
271717
Bacteroidota
GTC
Asp
>WENV170903144
MDTD01197301
271717
Bacteroidota
GTC
Asp
>WENV170889867
MDTD01002103
655581
Bacteroidota
GGT
Thr
>WENV170899076
MDTD01134885
240975
Bacteroidota
TAC
Val
>WENV170895727
MDTD01084122
454955
Bacteroidota
TGT
Thr
>WENV170900223
MDTD01151224
456729
Bacteroidota
GAA
Phe
>WENV170900811
MDTD01159851
674621
Bacteroidota
GGT
Thr
>WENV170890368
MDTD01008602
456414
Bacteroidota
GAA
Phe
>WENV170892933
MDTD01045274
456414
Bacteroidota
GAA
Phe
>WENV170893178
MDTD01048966
456414
Bacteroidota
GAA
Phe
>WENV170893802
MDTD01056578
456414
Bacteroidota
GAA
Phe
>WENV170894299
MDTD01063525
456414
Bacteroidota
GAA
Phe
>WENV170898951
MDTD01133163
456414
Bacteroidota
GAA
Phe
>WENV170899587
MDTD01142175
456414
Bacteroidota
GAA
Phe
>WENV170901443
MDTD01170715
456414
Bacteroidota
GAA
Phe
>WENV170902826
MDTD01191976
456414
Bacteroidota
GAA
Phe
>WENV170903123
MDTD01196964
456414
Bacteroidota
GAA
Phe
>WENV170891448
MDTD01024103
181647
Bacteroidota
TAG
Leu
>WENV170890606
MDTD01012860
452741
Bacteroidota
TCC
Gly
>WENV170895667
MDTD01082880
452741
Bacteroidota
TCC
Gly
>WENV170900810
MDTD01159851
452741
Bacteroidota
TCC
Gly
>WENV170901745
MDTD01175235
452741
Bacteroidota
TCC
Gly
>WENV170890319
MDTD01007875
452487
Bacteroidota
CCA
Trp
>WENV170890375
MDTD01008749
452487
Bacteroidota
CCA
Trp
>WENV170891688
MDTD01027786
452487
Bacteroidota
CCA
Trp
>WENV170894089
MDTD01060875
452487
Bacteroidota
CCA
Trp
>WENV170895669
MDTD01082880
452487
Bacteroidota
CCA
Trp
>WENV170897129
MDTD01106283
452487
Bacteroidota
CCA
Trp
>WENV170899717
MDTD01143708
452487
Bacteroidota
CCA
Trp
>WENV170889799
MDTD01000953
285374
Bacteroidota
GTC
Asp
>WENV170896946
MDTD01103483
272122
Bacteroidota
GTC
Asp
>WENV170889858
MDTD01002028
272122
Bacteroidota
GTC
Asp
>WENV170890315
MDTD01007834
272122
Bacteroidota
GTC
Asp
>WENV170891604
MDTD01026338
272122
Bacteroidota
GTC
Asp
>WENV170892758
MDTD01042479
272122
Bacteroidota
GTC
Asp
>WENV170894341
MDTD01063967
272122
Bacteroidota
GTC
Asp
>WENV170897329
MDTD01109918
272122
Bacteroidota
GTC
Asp
>WENV170897429
MDTD01111565
272122
Bacteroidota
GTC
Asp
>WENV170899506
MDTD01140769
272122
Bacteroidota
GTC
Asp
>WENV170899821
MDTD01145292
272122
Bacteroidota
GTC
Asp
>WENV170893491
MDTD01052546
655825
Bacteroidota
TTC
Glu
>WENV170893503
MDTD01052690
655825
Bacteroidota
TTC
Glu
>WENV170894591
MDTD01067900
655825
Bacteroidota
TTC
Glu
>WENV170889884
MDTD01002395
655825
Bacteroidota
TTC
Glu
>WENV170900651
MDTD01157476
779669
Bacteroidota
GCA
Cys
>WENV170890209
MDTD01006596
31447
Bacteroidota
GGA
Ser
>WENV170893636
MDTD01054502
459901
Bacteroidota
CCA
Trp
>WENV170901797
MDTD01175936
459901
Bacteroidota
CCA
Trp
>WENV170902324
MDTD01183268
180131
Bacteroidota
TAG
Leu
>WENV170899832
MDTD01145493
464575
Bacteroidota
GCC
Gly
>WENV170892780
MDTD01042696
241407
Bacteroidota
TGG
Pro
>WENV170903206
MDTD01198082
241407
Bacteroidota
TGG
Pro
>WENV170894073
MDTD01060572
452740
Bacteroidota
GAA
Phe
>WENV170900455
MDTD01154582
296387
Bacteroidota
CAT
Met
>WENV170900761
MDTD01159122
453189
Bacteroidota
TTG
Gln
>WENV170893337
MDTD01050456
241634
Bacteroidota
TGG
Pro
>WENV170898019
MDTD01119949
241634
Bacteroidota
TGG
Pro
>WENV170890186
MDTD01006097
278725
Bacteroidota
GTT
Asn
>WENV170897052
MDTD01105278
278725
Bacteroidota
GTT
Asn
>WENV170899496
MDTD01140588
278725
Bacteroidota
GTT
Asn
>WENV170902092
MDTD01179851
278725
Bacteroidota
GTT
Asn
>WENV170898260
MDTD01123271
454306
Bacteroidota
TTG
Gln
>WENV170901200
MDTD01166608
86958
Bacteroidota
TGA
Ser
>WENV170893200
MDTD01049255
272325
Bacteroidota
TGC
Ala
>WENV170895256
MDTD01077052
272325
Bacteroidota
TGC
Ala
>WENV170900816
MDTD01159906
281770
Bacteroidota
GTT
Asn
>WENV170890161
MDTD01005575
271642
Bacteroidota
TCT
Arg
>WENV170893220
MDTD01049484
271642
Bacteroidota
TCT
Arg
>WENV170890670
MDTD01013750
30383
Bacteroidota
GGA
Ser
>WENV170895278
MDTD01077251
30383
Bacteroidota
GGA
Ser
>WENV170900785
MDTD01159399
240683
Bacteroidota
TGG
Pro
>WENV170903151
MDTD01197369
240683
Bacteroidota
TGG
Pro
>WENV170896930
MDTD01103112
275165
Bacteroidota
TGT
Thr
>WENV170898399
MDTD01125323
275165
Bacteroidota
TGT
Thr
>WENV170899953
MDTD01147291
275165
Bacteroidota
TGT
Thr
>WENV170902144
MDTD01180660
275165
Bacteroidota
TGT
Thr
>WENV170894035
MDTD01060019
281767
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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