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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV084899
BABA01028899
202812
Bacillota
CAT
Met
>WENV084656
BABA01006147
309417
Bacillota
GGC
Ala
>WENV084581
BABA01003544
144612
Bacillota
TCT
Arg
>WENV084825
BABA01018021
267649
Bacillota
TAC
Val
>WENV084891
BABA01028213
235134
Bacillota
GAA
Phe
>WENV084756
BABA01012397
235098
Bacillota
GAC
Val
>WENV084932
BABA01033067
235098
Bacillota
GAC
Val
>WENV084880
BABA01026912
250201
Bacillota
TGC
Ala
>WENV084670
BABA01006609
235154
Bacillota
GTT
Asn
>WENV084788
BABA01014476
144577
Bacillota
GAT
Ile
>WENV084533
BABA01001556
144577
Bacillota
GAT
Ile
>WENV084600
BABA01004354
302150
Bacillota
TAC
Val
>WENV084707
BABA01009732
307003
Bacillota
TGC
Ala
>WENV084529
BABA01001375
235150
Bacillota
TGC
Ala
>WENV084680
BABA01007211
235137
Bacillota
TGC
Ala
>WENV084679
BABA01007204
235137
Bacillota
TGC
Ala
>WENV084629
BABA01005255
235137
Bacillota
TGC
Ala
>WENV084518
BABA01001174
235137
Bacillota
TGC
Ala
>WENV084700
BABA01008965
338143
Bacillota
CTC
Glu
>WENV084634
BABA01005664
341763
Bacillota
CTC
Glu
>WENV084926
BABA01031746
429429
Bacillota
CCA
Trp
>WENV084495
BABA01000477
235079
Bacillota
GAA
Phe
>WENV084789
BABA01014476
235087
Bacillota
TGC
Ala
>WENV084534
BABA01001556
235087
Bacillota
TGC
Ala
>WENV084499
BABA01000640
235087
Bacillota
TGC
Ala
>WENV084491
BABA01000464
338149
Bacillota
CTC
Glu
>WENV084795
BABA01014894
271471
Bacillota
GCC
Gly
>WENV084641
BABA01005664
271471
Bacillota
GCC
Gly
>WENV084527
BABA01001352
271471
Bacillota
GCC
Gly
>WENV084496
BABA01000477
271471
Bacillota
GCC
Gly
>WENV084615
BABA01004645
245298
Bacillota
CGG
Pro
>WENV084805
BABA01015513
353537
Bacillota
GTT
Asn
>WENV084616
BABA01004645
411547
Bacillota
CTG
Gln
>WENV084728
BABA01010552
313164
Bacillota
TTT
Lys
>WENV084904
BABA01029348
235095
Bacillota
GGT
Thr
>WENV084704
BABA01009416
235095
Bacillota
GGT
Thr
>WENV084819
BABA01017553
411549
Bacillota
TTG
Gln
>WENV084731
BABA01010552
147674
Bacillota
TCT
Arg
>WENV084716
BABA01009983
144583
Bacillota
ACG
Arg
>WENV084677
BABA01007204
247734
Bacillota
TGC
Ala
>WENV084831
BABA01018893
58712
Bacillota
CAG
Leu
>WENV084768
BABA01013162
58712
Bacillota
CAG
Leu
>WENV084830
BABA01018537
272992
Bacillota
CTT
Lys
>WENV084786
BABA01014237
338128
Bacillota
TTC
Glu
>WENV084720
BABA01010213
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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