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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV084838
BABA01019937
269918
Bacillota
CTT
Lys
>WENV084839
BABA01019937
269918
Bacillota
CTT
Lys
>WENV084840
BABA01019937
269918
Bacillota
CTT
Lys
>WENV084700
BABA01008965
369267
Bacillota
CTC
Glu
>WENV084727
BABA01010552
131007
Bacillota
TAG
Leu
>WENV084495
BABA01000477
257970
Bacillota
GAA
Phe
>WENV084731
BABA01010552
159079
Bacillota
TCT
Arg
>WENV084833
BABA01019034
261354
Bacillota
GGT
Thr
>WENV084938
BABA01034535
159076
Bacillota
CAT
Met
>WENV084664
BABA01006301
293469
Bacillota
GTT
Asn
>WENV084707
BABA01009732
258854
Bacillota
TGC
Ala
>WENV084899
BABA01028899
161902
Bacillota
CAT
Met
>WENV084854
BABA01023670
161902
Bacillota
CAT
Met
>WENV084615
BABA01004645
257972
Bacillota
CGG
Pro
>WENV084804
BABA01015395
371232
Bacillota
CTC
Glu
>WENV084717
BABA01010051
369273
Bacillota
TTG
Gln
>WENV084529
BABA01001375
286917
Bacillota
TGC
Ala
>WENV084616
BABA01004645
448255
Bacillota
CTG
Gln
>WENV084765
BABA01012808
49778
Bacillota
AAG
Leu
>WENV084496
BABA01000477
272758
Bacillota
GCC
Gly
>WENV084527
BABA01001352
272758
Bacillota
GCC
Gly
>WENV084597
BABA01004354
272758
Bacillota
GCC
Gly
>WENV084641
BABA01005664
272758
Bacillota
GCC
Gly
>WENV084795
BABA01014894
272758
Bacillota
GCC
Gly
>WENV084885
BABA01027705
162688
Bacillota
GAT
Ile
>WENV084846
BABA01020971
161895
Bacillota
GAC
Val
>WENV084581
BABA01003544
159237
Bacillota
TCT
Arg
>WENV084608
BABA01004408
257977
Bacillota
CGT
Thr
>WENV084658
BABA01006231
257977
Bacillota
CGT
Thr
>WENV084668
BABA01006609
371406
Bacillota
GCA
Cys
>WENV084767
BABA01012998
158271
Bacillota
CCT
Arg
>WENV084720
BABA01010213
369393
Bacillota
TTC
Glu
>WENV084786
BABA01014237
369393
Bacillota
TTC
Glu
>WENV084808
BABA01015577
293959
Bacillota
GGC
Ala
>WENV084577
BABA01003351
159074
Bacillota
ACG
Arg
>WENV084824
BABA01017887
159074
Bacillota
ACG
Arg
>WENV084474
BABA01000182
166292
Bacillota
GAT
Ile
>WENV084543
BABA01001765
166292
Bacillota
GAT
Ile
>WENV084880
BABA01026912
257812
Bacillota
TGC
Ala
>WENV084699
BABA01008965
257778
Bacillota
CGT
Thr
>WENV084805
BABA01015513
369508
Bacillota
>WENV084475
BABA01000182
320672
Bacillota
TGC
Ala
>WENV084542
BABA01001765
320672
Bacillota
TGC
Ala
>WENV084819
BABA01017553
448256
Bacillota
TTG
Gln
>WENV084797
BABA01014894
172620
Bacillota
GTC
Asp
>WENV084499
BABA01000640
258102
Bacillota
TGC
Ala
>WENV084534
BABA01001556
258102
Bacillota
TGC
Ala
>WENV084789
BABA01014476
258102
Bacillota
TGC
Ala
>WENV084533
BABA01001556
159345
Bacillota
GAT
Ile
>WENV084788
BABA01014476
159345
Bacillota
GAT
Ile
>WENV084701
BABA01008965
159063
Bacillota
CGG
Pro
>WENV084768
BABA01013162
64855
Bacillota
CAG
Leu
>WENV084831
BABA01018893
64855
Bacillota
CAG
Leu
>WENV084646
BABA01005695
105955
Bacillota
TAG
Leu
>WENV084580
BABA01003544
159238
Bacillota
GTG
His
>WENV084553
BABA01002118
261470
Bacillota
GTT
Asn
>WENV084738
BABA01011528
369391
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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