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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170031846
CDYJ01019422
144612
Bacillota
TCT
Arg
>WENV170031614
CDYJ01004164
267649
Bacillota
TAC
Val
>WENV170032242
CDYJ01046559
267649
Bacillota
TAC
Val
>WENV170031853
CDYJ01019646
339890
Bacillota
TTG
Gln
>WENV170031584
CDYJ01002749
235098
Bacillota
GAC
Val
>WENV170031676
CDYJ01007698
44854
Bacillota
TGA
Ser
>WENV170031870
CDYJ01020654
44854
Bacillota
TGA
Ser
>WENV170031723
CDYJ01010752
235154
Bacillota
GTT
Asn
>WENV170031993
CDYJ01029079
241441
Bacillota
GCC
Gly
>WENV170031626
CDYJ01004984
241441
Bacillota
GCC
Gly
>WENV170031784
CDYJ01016058
246023
Bacillota
TGC
Ala
>WENV170031984
CDYJ01028425
235137
Bacillota
TGC
Ala
>WENV170031682
CDYJ01007910
338143
Bacillota
CTC
Glu
>WENV170032274
CDYJ01048611
341763
Bacillota
CTC
Glu
>WENV170031786
CDYJ01016058
341763
Bacillota
CTC
Glu
>WENV170031648
CDYJ01006235
341763
Bacillota
CTC
Glu
>WENV170031852
CDYJ01019646
156937
Bacillota
GTG
His
>WENV170031987
CDYJ01028614
338149
Bacillota
CTC
Glu
>WENV170031745
CDYJ01012018
37269
Bacillota
TGA
Ser
>WENV170032163
CDYJ01041115
413152
Bacillota
TCC
Gly
>WENV170031997
CDYJ01029405
413152
Bacillota
TCC
Gly
>WENV170032190
CDYJ01042606
411547
Bacillota
CTG
Gln
>WENV170032054
CDYJ01032976
411547
Bacillota
CTG
Gln
>WENV170031871
CDYJ01020654
4624
Bacillota
GCT
Ser
>WENV170032074
CDYJ01034778
18852
Bacillota
GCT
Ser
>WENV170031957
CDYJ01026958
411549
Bacillota
TTG
Gln
>WENV170031640
CDYJ01005831
148188
Bacillota
CCG
Arg
>WENV170032227
CDYJ01045252
235127
Bacillota
TTT
Lys
>WENV170031885
CDYJ01022109
235124
Bacillota
TGG
Pro
>WENV170032279
CDYJ01049002
338129
Bacillota
TGT
Thr
>WENV170031821
CDYJ01018142
144672
Bacillota
TCT
Arg
>WENV170032098
CDYJ01035976
235171
Bacillota
CCA
Trp
>WENV170031955
CDYJ01026808
144621
Bacillota
GTT
Asn
>WENV170032298
CDYJ01050606
58712
Bacillota
CAG
Leu
>WENV170032065
CDYJ01034334
58712
Bacillota
CAG
Leu
>WENV170031861
CDYJ01020129
58712
Bacillota
CAG
Leu
>WENV170032018
CDYJ01031228
144594
Bacillota
CAC
Val
>WENV170031728
CDYJ01010769
338131
Bacillota
GCC
Gly
>WENV170031570
CDYJ01001591
338131
Bacillota
GCC
Gly
>WENV170031895
CDYJ01022405
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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