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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170036729
CDYP01000656
235087
Bacillota
TGC
Ala
>WENV170036730
CDYP01000656
144577
Bacillota
GAT
Ile
>WENV170036738
CDYP01001230
11034
Bacillota
GGA
Ser
>WENV170036751
CDYP01002007
235137
Bacillota
TGC
Ala
>WENV170036762
CDYP01002599
235095
Bacillota
GGT
Thr
>WENV170036765
CDYP01002807
148188
Bacillota
CCG
Arg
>WENV170036767
CDYP01002978
235091
Bacillota
CTT
Lys
>WENV170036781
CDYP01004332
144621
Bacillota
GTT
Asn
>WENV170036794
CDYP01005336
235124
Bacillota
TGG
Pro
>WENV170036797
CDYP01005736
240017
Bacillota
GCC
Gly
>WENV170036809
CDYP01006390
240017
Bacillota
GCC
Gly
>WENV170036816
CDYP01006750
338149
Bacillota
CTC
Glu
>WENV170036877
CDYP01009634
249259
Bacillota
GCC
Gly
>WENV170036879
CDYP01009634
249259
Bacillota
GCC
Gly
>WENV170036928
CDYP01012043
338131
Bacillota
GCC
Gly
>WENV170036941
CDYP01012513
338149
Bacillota
CTC
Glu
>WENV170036942
CDYP01012513
235091
Bacillota
CTT
Lys
>WENV170036963
CDYP01013842
338129
Bacillota
TGT
Thr
>WENV170036970
CDYP01014447
411547
Bacillota
CTG
Gln
>WENV170036976
CDYP01014632
44854
Bacillota
TGA
Ser
>WENV170036977
CDYP01014632
4624
Bacillota
GCT
Ser
>WENV170036991
CDYP01015503
235098
Bacillota
GAC
Val
>WENV170036993
CDYP01015505
153911
Bacillota
GAT
Ile
>WENV170037005
CDYP01016465
44854
Bacillota
TGA
Ser
>WENV170037014
CDYP01016858
144583
Bacillota
ACG
Arg
>WENV170037044
CDYP01018535
58712
Bacillota
CAG
Leu
>WENV170037045
CDYP01018538
247734
Bacillota
TGC
Ala
>WENV170037050
CDYP01018543
11034
Bacillota
GGA
Ser
>WENV170037063
CDYP01019113
144612
Bacillota
TCT
Arg
>WENV170037078
CDYP01019894
235098
Bacillota
GAC
Val
>WENV170037120
CDYP01021381
411547
Bacillota
CTG
Gln
>WENV170037121
CDYP01021381
245298
Bacillota
CGG
Pro
>WENV170037128
CDYP01022107
235154
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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