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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170042841
CDYU01018718
155958
Bacillota
GAT
Ile
>WENV170044071
CDYU01057046
144612
Bacillota
TCT
Arg
>WENV170043773
CDYU01048202
235098
Bacillota
GAC
Val
>WENV170044118
CDYU01058428
235098
Bacillota
GAC
Val
>WENV170043126
CDYU01028574
148239
Bacillota
TCT
Arg
>WENV170043888
CDYU01051925
44854
Bacillota
TGA
Ser
>WENV170042588
CDYU01012106
144577
Bacillota
GAT
Ile
>WENV170043352
CDYU01036098
37071
Bacillota
TGA
Ser
>WENV170043293
CDYU01034242
37071
Bacillota
TGA
Ser
>WENV170043525
CDYU01040221
59312
Bacillota
CAG
Leu
>WENV170042844
CDYU01018743
59312
Bacillota
CAG
Leu
>WENV170043200
CDYU01031148
238910
Bacillota
CTT
Lys
>WENV170043821
CDYU01050043
338147
Bacillota
CTC
Glu
>WENV170043150
CDYU01029420
338147
Bacillota
CTC
Glu
>WENV170042846
CDYU01018751
338147
Bacillota
CTC
Glu
>WENV170042704
CDYU01015276
338147
Bacillota
CTC
Glu
>WENV170043738
CDYU01047262
235150
Bacillota
TGC
Ala
>WENV170043327
CDYU01035597
235150
Bacillota
TGC
Ala
>WENV170043114
CDYU01028112
235150
Bacillota
TGC
Ala
>WENV170043573
CDYU01041533
235114
Bacillota
TTT
Lys
>WENV170042793
CDYU01017148
235114
Bacillota
TTT
Lys
>WENV170043079
CDYU01026807
235091
Bacillota
CTT
Lys
>WENV170043524
CDYU01040221
44859
Bacillota
AAG
Leu
>WENV170043523
CDYU01040221
44859
Bacillota
AAG
Leu
>WENV170042843
CDYU01018743
44859
Bacillota
AAG
Leu
>WENV170043984
CDYU01054644
11034
Bacillota
GGA
Ser
>WENV170043127
CDYU01028574
156937
Bacillota
GTG
His
>WENV170043856
CDYU01051216
235079
Bacillota
GAA
Phe
>WENV170042615
CDYU01012914
235079
Bacillota
GAA
Phe
>WENV170042587
CDYU01012106
235087
Bacillota
TGC
Ala
>WENV170043840
CDYU01050608
338149
Bacillota
CTC
Glu
>WENV170042950
CDYU01022503
245298
Bacillota
CGG
Pro
>WENV170043145
CDYU01029089
37269
Bacillota
TGA
Ser
>WENV170043112
CDYU01028112
37269
Bacillota
TGA
Ser
>WENV170042624
CDYU01013008
169968
Bacillota
CAT
Met
>WENV170043892
CDYU01052152
153911
Bacillota
GAT
Ile
>WENV170043558
CDYU01041509
153911
Bacillota
GAT
Ile
>WENV170042473
CDYU01008871
153911
Bacillota
GAT
Ile
>WENV170042791
CDYU01017148
144610
Bacillota
GTG
His
>WENV170043238
CDYU01032479
411547
Bacillota
CTG
Gln
>WENV170042949
CDYU01022503
411547
Bacillota
CTG
Gln
>WENV170043910
CDYU01052327
157156
Bacillota
TCT
Arg
>WENV170043889
CDYU01051925
4624
Bacillota
GCT
Ser
>WENV170043478
CDYU01039612
263765
Bacillota
TAC
Val
>WENV170042620
CDYU01012986
157193
Bacillota
GAT
Ile
>WENV170043483
CDYU01039621
235095
Bacillota
GGT
Thr
>WENV170043438
CDYU01038730
235095
Bacillota
GGT
Thr
>WENV170043392
CDYU01037372
344183
Bacillota
CTG
Gln
>WENV170042326
CDYU01005263
411549
Bacillota
TTG
Gln
>WENV170043848
CDYU01050895
235142
Bacillota
CTT
Lys
>WENV170042737
CDYU01016205
235142
Bacillota
CTT
Lys
>WENV170043280
CDYU01033867
245386
Bacillota
CCA
Trp
>WENV170042801
CDYU01017485
245386
Bacillota
CCA
Trp
>WENV170042225
CDYU01001909
148188
Bacillota
CCG
Arg
>WENV170043580
CDYU01041538
163943
Bacillota
GTC
Asp
>WENV170042970
CDYU01023067
163943
Bacillota
GTC
Asp
>WENV170042370
CDYU01006181
249522
Bacillota
TAC
Val
>WENV170043605
CDYU01042810
157838
Bacillota
GTC
Asp
>WENV170043521
CDYU01040179
157838
Bacillota
GTC
Asp
>WENV170043365
CDYU01036516
144583
Bacillota
ACG
Arg
>WENV170043567
CDYU01041533
144652
Bacillota
GTC
Asp
>WENV170042784
CDYU01017148
144652
Bacillota
GTC
Asp
>WENV170044111
CDYU01058293
247734
Bacillota
TGC
Ala
>WENV170042564
CDYU01011547
144621
Bacillota
GTT
Asn
>WENV170042346
CDYU01005321
144621
Bacillota
GTT
Asn
>WENV170043572
CDYU01041533
235113
Bacillota
GAA
Phe
>WENV170042670
CDYU01014307
235113
Bacillota
GAA
Phe
>WENV170043947
CDYU01053322
58712
Bacillota
CAG
Leu
>WENV170042981
CDYU01023413
58712
Bacillota
CAG
Leu
>WENV170043747
CDYU01047290
245296
Bacillota
CCC
Gly
>WENV170042924
CDYU01021652
144594
Bacillota
CAC
Val
>WENV170043570
CDYU01041533
95563
Bacillota
GTA
Tyr
>WENV170043915
CDYU01052358
238945
Bacillota
GCC
Gly
>WENV170043914
CDYU01052358
238945
Bacillota
GCC
Gly
>WENV170043857
CDYU01051216
249259
Bacillota
GCC
Gly
>WENV170043053
CDYU01025778
249259
Bacillota
GCC
Gly
>WENV170042618
CDYU01012914
249259
Bacillota
GCC
Gly
>WENV170042616
CDYU01012914
249259
Bacillota
GCC
Gly
>WENV170043520
CDYU01040179
263523
Bacillota
TAC
Val
>WENV170042974
CDYU01023067
338128
Bacillota
TTC
Glu
>WENV170042282
CDYU01003870
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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