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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
173 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170042472
CDYU01008455
235097
Bacteroidota
TTT
Lys
>WENV170043312
CDYU01034740
235097
Bacteroidota
TTT
Lys
>WENV170043705
CDYU01045889
235097
Bacteroidota
TTT
Lys
>WENV170043906
CDYU01052324
235097
Bacteroidota
TTT
Lys
>WENV170044117
CDYU01058422
235097
Bacteroidota
TTT
Lys
>WENV170043674
CDYU01045508
235102
Bacteroidota
CGT
Thr
>WENV170042763
CDYU01016675
144657
Bacteroidota
CGG
Pro
>WENV170042778
CDYU01017145
243025
Bacteroidota
CAT
Met
>WENV170043087
CDYU01027146
243025
Bacteroidota
CAT
Met
>WENV170043405
CDYU01037441
243025
Bacteroidota
CAT
Met
>WENV170044033
CDYU01056071
243025
Bacteroidota
CAT
Met
>WENV170042441
CDYU01007865
338155
Bacteroidota
CTC
Glu
>WENV170043388
CDYU01037030
338155
Bacteroidota
CTC
Glu
>WENV170043710
CDYU01046295
339341
Bacteroidota
GGT
Thr
>WENV170043309
CDYU01034734
343138
Bacteroidota
CCT
Arg
>WENV170043026
CDYU01024882
343138
Bacteroidota
CCT
Arg
>WENV170042777
CDYU01017144
343138
Bacteroidota
CCT
Arg
>WENV170043675
CDYU01045522
46165
Bacteroidota
TGA
Ser
>WENV170043516
CDYU01040167
17323
Bacteroidota
GGA
Ser
>WENV170043383
CDYU01036902
17323
Bacteroidota
GGA
Ser
>WENV170043590
CDYU01041970
338486
Bacteroidota
CAT
Met
>WENV170043508
CDYU01040150
338486
Bacteroidota
CAT
Met
>WENV170043144
CDYU01029066
338486
Bacteroidota
CAT
Met
>WENV170043143
CDYU01029066
338486
Bacteroidota
CAT
Met
>WENV170043789
CDYU01048505
48053
Bacteroidota
TGA
Ser
>WENV170043469
CDYU01039240
48053
Bacteroidota
TGA
Ser
>WENV170043443
CDYU01038745
48053
Bacteroidota
TGA
Ser
>WENV170042988
CDYU01023512
48053
Bacteroidota
TGA
Ser
>WENV170042986
CDYU01023510
48053
Bacteroidota
TGA
Ser
>WENV170042766
CDYU01017114
48053
Bacteroidota
TGA
Ser
>WENV170042736
CDYU01016204
48053
Bacteroidota
TGA
Ser
>WENV170042699
CDYU01015109
48053
Bacteroidota
TGA
Ser
>WENV170042688
CDYU01014795
48053
Bacteroidota
TGA
Ser
>WENV170042621
CDYU01012994
48053
Bacteroidota
TGA
Ser
>WENV170044009
CDYU01055099
415410
Bacteroidota
TTG
Gln
>WENV170043426
CDYU01038195
415410
Bacteroidota
TTG
Gln
>WENV170043319
CDYU01034885
415410
Bacteroidota
TTG
Gln
>WENV170043296
CDYU01034254
415410
Bacteroidota
TTG
Gln
>WENV170043035
CDYU01024969
415410
Bacteroidota
TTG
Gln
>WENV170042703
CDYU01015266
415410
Bacteroidota
TTG
Gln
>WENV170042768
CDYU01017138
59689
Bacteroidota
CAG
Leu
>WENV170042597
CDYU01012561
59689
Bacteroidota
CAG
Leu
>WENV170043824
CDYU01050047
80835
Bacteroidota
GTA
Tyr
>WENV170043369
CDYU01036521
80835
Bacteroidota
GTA
Tyr
>WENV170043056
CDYU01025884
237247
Bacteroidota
TTT
Lys
>WENV170043811
CDYU01049617
344692
Bacteroidota
GGT
Thr
>WENV170043604
CDYU01042805
344692
Bacteroidota
GGT
Thr
>WENV170042858
CDYU01019141
344692
Bacteroidota
GGT
Thr
>WENV170042654
CDYU01013846
344692
Bacteroidota
GGT
Thr
>WENV170043367
CDYU01036521
341950
Bacteroidota
>WENV170042987
CDYU01023511
341950
Bacteroidota
>WENV170042912
CDYU01021132
341950
Bacteroidota
>WENV170042726
CDYU01015773
341950
Bacteroidota
>WENV170042224
CDYU01001861
341950
Bacteroidota
>WENV170044026
CDYU01055634
338124
Bacteroidota
CCG
Arg
>WENV170043301
CDYU01034570
338124
Bacteroidota
CCG
Arg
>WENV170042640
CDYU01013416
146800
Bacteroidota
>WENV170043599
CDYU01042605
168744
Bacteroidota
GTG
His
>WENV170043194
CDYU01030819
168744
Bacteroidota
GTG
His
>WENV170042911
CDYU01021132
168744
Bacteroidota
GTG
His
>WENV170043082
CDYU01026828
235203
Bacteroidota
TTT
Lys
>WENV170042908
CDYU01021127
235203
Bacteroidota
TTT
Lys
>WENV170043677
CDYU01045522
238121
Bacteroidota
CTT
Lys
>WENV170043676
CDYU01045522
238121
Bacteroidota
CTT
Lys
>WENV170043432
CDYU01038310
126641
Bacteroidota
TAC
Val
>WENV170043431
CDYU01038310
126641
Bacteroidota
TAC
Val
>WENV170043689
CDYU01045555
338132
Bacteroidota
GCA
Cys
>WENV170043636
CDYU01044099
338132
Bacteroidota
GCA
Cys
>WENV170042742
CDYU01016212
338132
Bacteroidota
GCA
Cys
>WENV170042524
CDYU01010210
338132
Bacteroidota
GCA
Cys
>WENV170042407
CDYU01006837
338132
Bacteroidota
GCA
Cys
>WENV170043678
CDYU01045522
45423
Bacteroidota
TGA
Ser
>WENV170042534
CDYU01010737
58714
Bacteroidota
CAA
Leu
>WENV170043957
CDYU01053724
235165
Bacteroidota
CCA
Trp
>WENV170043951
CDYU01053347
144933
Bacteroidota
TCT
Arg
>WENV170044066
CDYU01057013
149691
Bacteroidota
GTT
Asn
>WENV170044065
CDYU01057013
149691
Bacteroidota
GTT
Asn
>WENV170044061
CDYU01056982
149691
Bacteroidota
GTT
Asn
>WENV170043136
CDYU01029047
149691
Bacteroidota
GTT
Asn
>WENV170043111
CDYU01028072
149691
Bacteroidota
GTT
Asn
>WENV170043110
CDYU01028072
149691
Bacteroidota
GTT
Asn
>WENV170043109
CDYU01028072
149691
Bacteroidota
GTT
Asn
>WENV170043025
CDYU01024880
149691
Bacteroidota
GTT
Asn
>WENV170043024
CDYU01024880
149691
Bacteroidota
GTT
Asn
>WENV170042775
CDYU01017144
149691
Bacteroidota
GTT
Asn
>WENV170042774
CDYU01017144
149691
Bacteroidota
GTT
Asn
>WENV170042674
CDYU01014313
149691
Bacteroidota
GTT
Asn
>WENV170042673
CDYU01014313
149691
Bacteroidota
GTT
Asn
>WENV170043752
CDYU01047297
171336
Bacteroidota
GGC
Ala
>WENV170042188
CDYU01000532
144656
Bacteroidota
GTG
His
>WENV170043809
CDYU01049614
235207
Bacteroidota
CAT
Met
>WENV170043080
CDYU01026810
235207
Bacteroidota
CAT
Met
>WENV170043407
CDYU01037448
144659
Bacteroidota
GTG
His
>WENV170043406
CDYU01037448
144659
Bacteroidota
GTG
His
>WENV170042470
CDYU01008452
144659
Bacteroidota
GTG
His
>WENV170043325
CDYU01035219
144596
Bacteroidota
GGC
Ala
>WENV170042255
CDYU01003369
144596
Bacteroidota
GGC
Ala
>WENV170042197
CDYU01000700
144596
Bacteroidota
GGC
Ala
>WENV170043860
CDYU01051361
80607
Bacteroidota
GTA
Tyr
>WENV170043310
CDYU01034735
80607
Bacteroidota
GTA
Tyr
>WENV170043050
CDYU01025539
80607
Bacteroidota
GTA
Tyr
>WENV170042824
CDYU01017986
80607
Bacteroidota
GTA
Tyr
>WENV170042480
CDYU01008880
113604
Bacteroidota
>WENV170042477
CDYU01008880
113604
Bacteroidota
>WENV170042474
CDYU01008880
113604
Bacteroidota
>WENV170042383
CDYU01006250
113604
Bacteroidota
>WENV170042380
CDYU01006250
113604
Bacteroidota
>WENV170043104
CDYU01027672
16999
Bacteroidota
GGA
Ser
>WENV170042572
CDYU01012032
16999
Bacteroidota
GGA
Ser
>WENV170044013
CDYU01055119
80614
Bacteroidota
>WENV170043875
CDYU01051837
80614
Bacteroidota
>WENV170043709
CDYU01046295
80614
Bacteroidota
>WENV170043642
CDYU01044105
80614
Bacteroidota
>WENV170042864
CDYU01019333
80614
Bacteroidota
>WENV170043827
CDYU01050047
154643
Bacteroidota
CAT
Met
>WENV170043373
CDYU01036521
154643
Bacteroidota
CAT
Met
>WENV170043193
CDYU01030797
154643
Bacteroidota
CAT
Met
>WENV170042290
CDYU01003887
154643
Bacteroidota
CAT
Met
>WENV170043499
CDYU01039841
144590
Bacteroidota
GTT
Asn
>WENV170043498
CDYU01039841
144590
Bacteroidota
GTT
Asn
>WENV170043497
CDYU01039841
144590
Bacteroidota
GTT
Asn
>WENV170043496
CDYU01039841
144590
Bacteroidota
GTT
Asn
>WENV170042822
CDYU01017986
144590
Bacteroidota
GTT
Asn
>WENV170042821
CDYU01017986
144590
Bacteroidota
GTT
Asn
>WENV170043794
CDYU01048674
95559
Bacteroidota
TAG
Leu
>WENV170042687
CDYU01014787
419272
Bacteroidota
CTG
Gln
>WENV170044025
CDYU01055618
144655
Bacteroidota
GGC
Ala
>WENV170042968
CDYU01023060
144655
Bacteroidota
GGC
Ala
>WENV170042418
CDYU01007066
144639
Bacteroidota
GGC
Ala
>WENV170043308
CDYU01034734
338164
Bacteroidota
TTC
Glu
>WENV170043307
CDYU01034734
338164
Bacteroidota
TTC
Glu
>WENV170043338
CDYU01035650
95875
Bacteroidota
TAG
Leu
>WENV170042863
CDYU01019233
95875
Bacteroidota
TAG
Leu
>WENV170043588
CDYU01041734
151121
Bacteroidota
CAT
Met
>WENV170043509
CDYU01040151
240012
Bacteroidota
CCC
Gly
>WENV170043227
CDYU01032463
240012
Bacteroidota
CCC
Gly
>WENV170042813
CDYU01017965
44852
Bacteroidota
TAA
Leu
>WENV170043510
CDYU01040151
147439
Bacteroidota
TCT
Arg
>WENV170042367
CDYU01006174
150485
Bacteroidota
GTT
Asn
>WENV170042366
CDYU01006174
150485
Bacteroidota
GTT
Asn
>WENV170042365
CDYU01006174
150485
Bacteroidota
GTT
Asn
>WENV170042401
CDYU01006627
411550
Bacteroidota
CTG
Gln
>WENV170042400
CDYU01006627
411550
Bacteroidota
CTG
Gln
>WENV170044121
CDYU01058429
338165
Bacteroidota
GGT
Thr
>WENV170043262
CDYU01033380
239647
Bacteroidota
TTT
Lys
>WENV170042215
CDYU01001538
239647
Bacteroidota
TTT
Lys
>WENV170043231
CDYU01032468
128548
Bacteroidota
TAC
Val
>WENV170044027
CDYU01055880
353927
Bacteroidota
TTC
Glu
>WENV170043968
CDYU01054024
353927
Bacteroidota
TTC
Glu
>WENV170043494
CDYU01039677
353927
Bacteroidota
TTC
Glu
>WENV170043228
CDYU01032468
353927
Bacteroidota
TTC
Glu
>WENV170043015
CDYU01024876
353927
Bacteroidota
TTC
Glu
>WENV170043014
CDYU01024876
353927
Bacteroidota
TTC
Glu
>WENV170043387
CDYU01037030
23696
Bacteroidota
GCT
Ser
>WENV170042942
CDYU01022117
23696
Bacteroidota
GCT
Ser
>WENV170042440
CDYU01007865
23696
Bacteroidota
GCT
Ser
>WENV170043519
CDYU01040167
414426
Bacteroidota
CTG
Gln
>WENV170043271
CDYU01033717
414426
Bacteroidota
CTG
Gln
>WENV170043142
CDYU01029064
414426
Bacteroidota
CTG
Gln
>WENV170042258
CDYU01003372
414426
Bacteroidota
CTG
Gln
>WENV170042999
CDYU01023899
16224
Bacteroidota
GGA
Ser
>WENV170042994
CDYU01023672
16224
Bacteroidota
GGA
Ser
>WENV170043597
CDYU01042430
151960
Bacteroidota
GGC
Ala
>WENV170043218
CDYU01031641
151960
Bacteroidota
GGC
Ala
>WENV170042915
CDYU01021147
151960
Bacteroidota
GGC
Ala
>WENV170043512
CDYU01040159
16220
Bacteroidota
GGA
Ser
>WENV170042260
CDYU01003376
338125
Bacteroidota
CCT
Arg
>WENV170042210
CDYU01001359
338125
Bacteroidota
CCT
Arg
>WENV170044011
CDYU01055104
235129
Bacteroidota
GCC
Gly
>WENV170043408
CDYU01037451
235129
Bacteroidota
GCC
Gly
>WENV170043099
CDYU01027285
235129
Bacteroidota
GCC
Gly
>WENV170043042
CDYU01025364
235129
Bacteroidota
GCC
Gly
>WENV170043905
CDYU01052321
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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