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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170061611
CDZI01056458
283277
Bacillota
GTT
Asn
>WENV170060937
CDZI01026483
270088
Bacillota
CGT
Thr
>WENV170061839
CDZI01066765
257968
Bacillota
GCC
Gly
>WENV170060986
CDZI01028590
369774
Bacillota
GGT
Thr
>WENV170061305
CDZI01042266
70198
Bacillota
CAA
Leu
>WENV170061463
CDZI01050732
369809
Bacillota
CTC
Glu
>WENV170061738
CDZI01061691
369809
Bacillota
CTC
Glu
>WENV170061176
CDZI01037142
182782
Bacillota
ACG
Arg
>WENV170060915
CDZI01025750
269920
Bacillota
CGC
Ala
>WENV170061919
CDZI01070189
269920
Bacillota
CGC
Ala
>WENV170060608
CDZI01010362
410090
Bacillota
GCC
Gly
>WENV170061064
CDZI01032671
410090
Bacillota
GCC
Gly
>WENV170061992
CDZI01072847
410090
Bacillota
GCC
Gly
>WENV170062018
CDZI01074016
410090
Bacillota
GCC
Gly
>WENV170060886
CDZI01024763
293469
Bacillota
GTT
Asn
>WENV170061198
CDZI01038555
124618
Bacillota
GAG
Leu
>WENV170061849
CDZI01067293
451223
Bacillota
GCA
Cys
>WENV170061587
CDZI01056316
286917
Bacillota
TGC
Ala
>WENV170061187
CDZI01037805
448255
Bacillota
CTG
Gln
>WENV170061196
CDZI01038510
448255
Bacillota
CTG
Gln
>WENV170061437
CDZI01049480
448255
Bacillota
CTG
Gln
>WENV170061479
CDZI01051031
448255
Bacillota
CTG
Gln
>WENV170061518
CDZI01053242
272758
Bacillota
GCC
Gly
>WENV170060976
CDZI01027555
269973
Bacillota
CCA
Trp
>WENV170060384
CDZI01002726
162688
Bacillota
GAT
Ile
>WENV170061136
CDZI01036233
162688
Bacillota
GAT
Ile
>WENV170061356
CDZI01045035
162688
Bacillota
GAT
Ile
>WENV170061735
CDZI01061633
162688
Bacillota
GAT
Ile
>WENV170061669
CDZI01059078
133221
Bacillota
CAA
Leu
>WENV170061069
CDZI01032706
106802
Bacillota
GTA
Tyr
>WENV170061916
CDZI01069932
106802
Bacillota
GTA
Tyr
>WENV170061085
CDZI01033875
47790
Bacillota
TGA
Ser
>WENV170060550
CDZI01007634
90522
Bacillota
CAG
Leu
>WENV170061443
CDZI01049992
90522
Bacillota
CAG
Leu
>WENV170061445
CDZI01049992
90522
Bacillota
CAG
Leu
>WENV170061447
CDZI01049992
90522
Bacillota
CAG
Leu
>WENV170061515
CDZI01053156
374673
Bacillota
CTC
Glu
>WENV170061564
CDZI01055183
374673
Bacillota
CTC
Glu
>WENV170061672
CDZI01059103
374673
Bacillota
CTC
Glu
>WENV170061199
CDZI01038555
131005
Bacillota
TAG
Leu
>WENV170060386
CDZI01002752
369393
Bacillota
TTC
Glu
>WENV170060962
CDZI01027131
369393
Bacillota
TTC
Glu
>WENV170060801
CDZI01020204
170692
Bacillota
CAT
Met
>WENV170061094
CDZI01034346
56553
Bacillota
CAG
Leu
>WENV170061095
CDZI01034346
56553
Bacillota
CAG
Leu
>WENV170061549
CDZI01055115
369390
Bacillota
TGT
Thr
>WENV170061346
CDZI01044958
11993
Bacillota
GGA
Ser
>WENV170060849
CDZI01023170
277767
Bacillota
CGC
Ala
>WENV170061393
CDZI01046655
258126
Bacillota
GCC
Gly
>WENV170062013
CDZI01074012
162605
Bacillota
CCT
Arg
>WENV170060871
CDZI01024249
308738
Bacillota
TTG
Gln
>WENV170061003
CDZI01030065
448256
Bacillota
TTG
Gln
>WENV170060430
CDZI01004343
167205
Bacillota
TAC
Val
>WENV170061012
CDZI01030466
167205
Bacillota
TAC
Val
>WENV170061756
CDZI01062880
167205
Bacillota
TAC
Val
>WENV170060586
CDZI01009465
182424
Bacillota
CAT
Met
>WENV170060573
CDZI01008870
261310
Bacillota
CGT
Thr
>WENV170061808
CDZI01064751
261310
Bacillota
CGT
Thr
>WENV170061500
CDZI01051948
283213
Bacillota
CTT
Lys
>WENV170061736
CDZI01061633
283213
Bacillota
CTT
Lys
>WENV170061928
CDZI01070463
159862
Bacillota
>WENV170060719
CDZI01015295
258102
Bacillota
TGC
Ala
>WENV170060934
CDZI01026431
258102
Bacillota
TGC
Ala
>WENV170061214
CDZI01039173
159236
Bacillota
GTT
Asn
>WENV170061659
CDZI01058566
257976
Bacillota
CCC
Gly
>WENV170060552
CDZI01007881
375901
Bacillota
CCG
Arg
>WENV170060720
CDZI01015295
159345
Bacillota
GAT
Ile
>WENV170061400
CDZI01047245
159345
Bacillota
GAT
Ile
>WENV170060540
CDZI01007595
258131
Bacillota
TGT
Thr
>WENV170061068
CDZI01032706
258131
Bacillota
TGT
Thr
>WENV170061915
CDZI01069932
258131
Bacillota
TGT
Thr
>WENV170060481
CDZI01005163
172178
Bacillota
GGG
Pro
>WENV170061568
CDZI01055713
369391
Bacillota
TCC
Gly
>WENV170060431
CDZI01004343
222762
Bacillota
GTC
Asp
>WENV170061090
CDZI01033974
222762
Bacillota
GTC
Asp
>WENV170061614
CDZI01056458
222762
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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