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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170061197
CDZI01038524
235098
Bacillota
GAC
Val
>WENV170060663
CDZI01013173
148239
Bacillota
TCT
Arg
>WENV170060720
CDZI01015295
144577
Bacillota
GAT
Ile
>WENV170061400
CDZI01047245
144577
Bacillota
GAT
Ile
>WENV170061839
CDZI01066765
304022
Bacillota
GCC
Gly
>WENV170061587
CDZI01056316
235150
Bacillota
TGC
Ala
>WENV170061928
CDZI01070463
155273
Bacillota
CAT
Met
>WENV170060752
CDZI01017103
429429
Bacillota
CCA
Trp
>WENV170060432
CDZI01004343
313454
Bacillota
GAA
Phe
>WENV170061346
CDZI01044958
11034
Bacillota
GGA
Ser
>WENV170060664
CDZI01013173
156937
Bacillota
GTG
His
>WENV170061967
CDZI01072173
274189
Bacillota
TGT
Thr
>WENV170060934
CDZI01026431
235087
Bacillota
TGC
Ala
>WENV170060719
CDZI01015295
235087
Bacillota
TGC
Ala
>WENV170061935
CDZI01071046
173314
Bacillota
GAT
Ile
>WENV170061572
CDZI01055779
173314
Bacillota
GAT
Ile
>WENV170061182
CDZI01037447
173314
Bacillota
GAT
Ile
>WENV170061251
CDZI01040702
338149
Bacillota
CTC
Glu
>WENV170061085
CDZI01033875
37269
Bacillota
TGA
Ser
>WENV170060563
CDZI01008258
169968
Bacillota
CAT
Met
>WENV170061735
CDZI01061633
153911
Bacillota
GAT
Ile
>WENV170061479
CDZI01051031
411547
Bacillota
CTG
Gln
>WENV170061437
CDZI01049480
411547
Bacillota
CTG
Gln
>WENV170061196
CDZI01038510
411547
Bacillota
CTG
Gln
>WENV170061187
CDZI01037805
411547
Bacillota
CTG
Gln
>WENV170061089
CDZI01033974
263765
Bacillota
TAC
Val
>WENV170060581
CDZI01009363
313104
Bacillota
TAC
Val
>WENV170061063
CDZI01032642
235095
Bacillota
GGT
Thr
>WENV170061003
CDZI01030065
411549
Bacillota
TTG
Gln
>WENV170061757
CDZI01062880
163943
Bacillota
GTC
Asp
>WENV170061306
CDZI01042365
163943
Bacillota
GTC
Asp
>WENV170061249
CDZI01040701
163943
Bacillota
GTC
Asp
>WENV170061013
CDZI01030466
163943
Bacillota
GTC
Asp
>WENV170060482
CDZI01005584
163943
Bacillota
GTC
Asp
>WENV170061549
CDZI01055115
338129
Bacillota
TGT
Thr
>WENV170061614
CDZI01056458
157838
Bacillota
GTC
Asp
>WENV170061090
CDZI01033974
157838
Bacillota
GTC
Asp
>WENV170060431
CDZI01004343
157838
Bacillota
GTC
Asp
>WENV170060856
CDZI01023579
292519
Bacillota
CAT
Met
>WENV170060566
CDZI01008786
144583
Bacillota
ACG
Arg
>WENV170061052
CDZI01032161
247734
Bacillota
TGC
Ala
>WENV170061214
CDZI01039173
144621
Bacillota
GTT
Asn
>WENV170061659
CDZI01058566
245296
Bacillota
CCC
Gly
>WENV170061201
CDZI01038581
272992
Bacillota
CTT
Lys
>WENV170060732
CDZI01015757
344240
Bacillota
GCC
Gly
>WENV170061934
CDZI01071046
299139
Bacillota
TGC
Ala
>WENV170061571
CDZI01055779
299139
Bacillota
TGC
Ala
>WENV170061181
CDZI01037447
299139
Bacillota
TGC
Ala
>WENV170060962
CDZI01027131
338128
Bacillota
TTC
Glu
>WENV170060386
CDZI01002752
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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