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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170062224
CDZJ01005772
235097
Bacteroidota
TTT
Lys
>WENV170062319
CDZJ01009313
235097
Bacteroidota
TTT
Lys
>WENV170062759
CDZJ01025749
235097
Bacteroidota
TTT
Lys
>WENV170062838
CDZJ01028765
235097
Bacteroidota
TTT
Lys
>WENV170062845
CDZJ01028966
235097
Bacteroidota
TTT
Lys
>WENV170062930
CDZJ01031604
235097
Bacteroidota
TTT
Lys
>WENV170062523
CDZJ01017751
235102
Bacteroidota
CGT
Thr
>WENV170062763
CDZJ01025912
144657
Bacteroidota
CGG
Pro
>WENV170062073
CDZJ01001573
338155
Bacteroidota
CTC
Glu
>WENV170062548
CDZJ01019100
339341
Bacteroidota
GGT
Thr
>WENV170062351
CDZJ01010462
58715
Bacteroidota
GAG
Leu
>WENV170062438
CDZJ01014434
338486
Bacteroidota
CAT
Met
>WENV170062088
CDZJ01001941
338486
Bacteroidota
CAT
Met
>WENV170062507
CDZJ01016929
411543
Bacteroidota
CTG
Gln
>WENV170062839
CDZJ01028766
436206
Bacteroidota
TTG
Gln
>WENV170062734
CDZJ01024752
436206
Bacteroidota
TTG
Gln
>WENV170062216
CDZJ01005731
436206
Bacteroidota
TTG
Gln
>WENV170062549
CDZJ01019100
20893
Bacteroidota
GGA
Ser
>WENV170062212
CDZJ01005553
237247
Bacteroidota
TTT
Lys
>WENV170062266
CDZJ01007650
338124
Bacteroidota
CCG
Arg
>WENV170062416
CDZJ01013062
238121
Bacteroidota
CTT
Lys
>WENV170062415
CDZJ01013062
238121
Bacteroidota
CTT
Lys
>WENV170062414
CDZJ01013062
238121
Bacteroidota
CTT
Lys
>WENV170062522
CDZJ01017596
126641
Bacteroidota
TAC
Val
>WENV170062521
CDZJ01017596
126641
Bacteroidota
TAC
Val
>WENV170062599
CDZJ01021318
338132
Bacteroidota
GCA
Cys
>WENV170062479
CDZJ01016015
338132
Bacteroidota
GCA
Cys
>WENV170062308
CDZJ01008651
338132
Bacteroidota
GCA
Cys
>WENV170062244
CDZJ01006553
338132
Bacteroidota
GCA
Cys
>WENV170062035
CDZJ01000236
338132
Bacteroidota
GCA
Cys
>WENV170062667
CDZJ01023382
193809
Bacteroidota
CAT
Met
>WENV170062666
CDZJ01023382
193809
Bacteroidota
CAT
Met
>WENV170062689
CDZJ01023609
301449
Bacteroidota
CGG
Pro
>WENV170062662
CDZJ01022932
301449
Bacteroidota
CGG
Pro
>WENV170062492
CDZJ01016653
301449
Bacteroidota
CGG
Pro
>WENV170062443
CDZJ01014453
301449
Bacteroidota
CGG
Pro
>WENV170062241
CDZJ01006550
301449
Bacteroidota
CGG
Pro
>WENV170062159
CDZJ01004323
301449
Bacteroidota
CGG
Pro
>WENV170062437
CDZJ01014434
144933
Bacteroidota
TCT
Arg
>WENV170062615
CDZJ01021656
144656
Bacteroidota
GTG
His
>WENV170062285
CDZJ01008101
235207
Bacteroidota
CAT
Met
>WENV170062280
CDZJ01008100
235207
Bacteroidota
CAT
Met
>WENV170062094
CDZJ01002061
235207
Bacteroidota
CAT
Met
>WENV170062126
CDZJ01003159
143169
Bacteroidota
GGG
Pro
>WENV170062581
CDZJ01020337
143169
Bacteroidota
GGG
Pro
>WENV170062223
CDZJ01005772
143169
Bacteroidota
GGG
Pro
>WENV170062736
CDZJ01024759
144596
Bacteroidota
GGC
Ala
>WENV170062774
CDZJ01026230
80607
Bacteroidota
GTA
Tyr
>WENV170062746
CDZJ01025048
80607
Bacteroidota
GTA
Tyr
>WENV170062481
CDZJ01016039
80607
Bacteroidota
GTA
Tyr
>WENV170062860
CDZJ01029645
113604
Bacteroidota
>WENV170062857
CDZJ01029645
113604
Bacteroidota
>WENV170062409
CDZJ01012775
80614
Bacteroidota
>WENV170062274
CDZJ01007892
80614
Bacteroidota
>WENV170062248
CDZJ01006608
80614
Bacteroidota
>WENV170062608
CDZJ01021559
144590
Bacteroidota
GTT
Asn
>WENV170062607
CDZJ01021559
144590
Bacteroidota
GTT
Asn
>WENV170062149
CDZJ01003922
144590
Bacteroidota
GTT
Asn
>WENV170062587
CDZJ01020625
95559
Bacteroidota
TAG
Leu
>WENV170062110
CDZJ01002935
144655
Bacteroidota
GGC
Ala
>WENV170062333
CDZJ01009664
95875
Bacteroidota
TAG
Leu
>WENV170062439
CDZJ01014434
240012
Bacteroidota
CCC
Gly
>WENV170062579
CDZJ01020323
44852
Bacteroidota
TAA
Leu
>WENV170062141
CDZJ01003718
338165
Bacteroidota
GGT
Thr
>WENV170062512
CDZJ01017106
19528
Bacteroidota
GGA
Ser
>WENV170062844
CDZJ01028834
425638
Bacteroidota
CTG
Gln
>WENV170062828
CDZJ01028172
425638
Bacteroidota
CTG
Gln
>WENV170062847
CDZJ01029069
425638
Bacteroidota
CTG
Gln
>WENV170062545
CDZJ01019099
239647
Bacteroidota
TTT
Lys
>WENV170062735
CDZJ01024755
19317
Bacteroidota
GGA
Ser
>WENV170062405
CDZJ01012656
185921
Bacteroidota
GTC
Asp
>WENV170062275
CDZJ01007892
185921
Bacteroidota
GTC
Asp
>WENV170062072
CDZJ01001573
23696
Bacteroidota
GCT
Ser
>WENV170062511
CDZJ01017106
56823
Bacteroidota
TGA
Ser
>WENV170062510
CDZJ01017106
56823
Bacteroidota
TGA
Ser
>WENV170062480
CDZJ01016038
56823
Bacteroidota
TGA
Ser
>WENV170062411
CDZJ01013060
56823
Bacteroidota
TGA
Ser
>WENV170062208
CDZJ01005542
56823
Bacteroidota
TGA
Ser
>WENV170062755
CDZJ01025749
16224
Bacteroidota
GGA
Ser
>WENV170062609
CDZJ01021566
16224
Bacteroidota
GGA
Ser
>WENV170062815
CDZJ01027814
16220
Bacteroidota
GGA
Ser
>WENV170062656
CDZJ01022815
338125
Bacteroidota
CCT
Arg
>WENV170062620
CDZJ01021886
338125
Bacteroidota
CCT
Arg
>WENV170062585
CDZJ01020618
338125
Bacteroidota
CCT
Arg
>WENV170062477
CDZJ01015978
338125
Bacteroidota
CCT
Arg
>WENV170062217
CDZJ01005731
338125
Bacteroidota
CCT
Arg
>WENV170062555
CDZJ01019100
235129
Bacteroidota
GCC
Gly
>WENV170062553
CDZJ01019100
235129
Bacteroidota
GCC
Gly
>WENV170062349
CDZJ01010462
235129
Bacteroidota
GCC
Gly
>WENV170062312
CDZJ01008700
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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