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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170077876
CDZV01000900
151960
Bacteroidota
GGC
Ala
>WENV170077886
CDZV01001356
353927
Bacteroidota
TTC
Glu
>WENV170077891
CDZV01001359
235129
Bacteroidota
GCC
Gly
>WENV170077889
CDZV01001359
235129
Bacteroidota
GCC
Gly
>WENV170077960
CDZV01002934
80614
Bacteroidota
>WENV170077965
CDZV01003305
17323
Bacteroidota
GGA
Ser
>WENV170077995
CDZV01004883
154643
Bacteroidota
CAT
Met
>WENV170078025
CDZV01006775
144659
Bacteroidota
GTG
His
>WENV170078024
CDZV01006775
144659
Bacteroidota
GTG
His
>WENV170078028
CDZV01007274
52358
Bacteroidota
TGA
Ser
>WENV170078056
CDZV01007779
58715
Bacteroidota
GAG
Leu
>WENV170078054
CDZV01007779
235129
Bacteroidota
GCC
Gly
>WENV170078063
CDZV01008227
237247
Bacteroidota
TTT
Lys
>WENV170078064
CDZV01008228
16220
Bacteroidota
GGA
Ser
>WENV170078076
CDZV01009185
243025
Bacteroidota
CAT
Met
>WENV170078091
CDZV01009587
415410
Bacteroidota
TTG
Gln
>WENV170078105
CDZV01009975
339341
Bacteroidota
GGT
Thr
>WENV170078110
CDZV01010192
145504
Bacteroidota
TGT
Thr
>WENV170078113
CDZV01010223
150485
Bacteroidota
GTT
Asn
>WENV170078161
CDZV01012199
132360
Bacteroidota
GGG
Pro
>WENV170078196
CDZV01013562
344692
Bacteroidota
GGT
Thr
>WENV170078195
CDZV01013562
341950
Bacteroidota
>WENV170078203
CDZV01013573
144657
Bacteroidota
CGG
Pro
>WENV170078212
CDZV01014048
59689
Bacteroidota
CAG
Leu
>WENV170078217
CDZV01014253
144655
Bacteroidota
GGC
Ala
>WENV170078238
CDZV01014697
80614
Bacteroidota
>WENV170078236
CDZV01014697
185921
Bacteroidota
GTC
Asp
>WENV170078250
CDZV01015254
301449
Bacteroidota
CGG
Pro
>WENV170078254
CDZV01015540
338155
Bacteroidota
CTC
Glu
>WENV170078270
CDZV01016037
58715
Bacteroidota
GAG
Leu
>WENV170078268
CDZV01016037
235129
Bacteroidota
GCC
Gly
>WENV170078287
CDZV01016438
235207
Bacteroidota
CAT
Met
>WENV170078292
CDZV01016859
23696
Bacteroidota
GCT
Ser
>WENV170078319
CDZV01018694
235129
Bacteroidota
GCC
Gly
>WENV170078331
CDZV01019976
95875
Bacteroidota
TAG
Leu
>WENV170078344
CDZV01020443
301449
Bacteroidota
CGG
Pro
>WENV170078354
CDZV01020932
144933
Bacteroidota
TCT
Arg
>WENV170078360
CDZV01021042
338486
Bacteroidota
CAT
Met
>WENV170078362
CDZV01021411
235102
Bacteroidota
CGT
Thr
>WENV170078365
CDZV01021489
243025
Bacteroidota
CAT
Met
>WENV170078446
CDZV01025692
80607
Bacteroidota
GTA
Tyr
>WENV170078454
CDZV01025747
144639
Bacteroidota
GGC
Ala
>WENV170078477
CDZV01026726
144933
Bacteroidota
TCT
Arg
>WENV170078479
CDZV01026813
353927
Bacteroidota
TTC
Glu
>WENV170078571
CDZV01031366
353927
Bacteroidota
TTC
Glu
>WENV170078570
CDZV01031366
353927
Bacteroidota
TTC
Glu
>WENV170078595
CDZV01031901
154643
Bacteroidota
CAT
Met
>WENV170078660
CDZV01034025
144655
Bacteroidota
GGC
Ala
>WENV170078662
CDZV01034278
338132
Bacteroidota
GCA
Cys
>WENV170078663
CDZV01034349
95559
Bacteroidota
TAG
Leu
>WENV170078667
CDZV01034719
414426
Bacteroidota
CTG
Gln
>WENV170078672
CDZV01034761
425638
Bacteroidota
CTG
Gln
>WENV170078805
CDZV01040003
338124
Bacteroidota
CCG
Arg
>WENV170078818
CDZV01040860
23696
Bacteroidota
GCT
Ser
>WENV170078833
CDZV01041218
414426
Bacteroidota
CTG
Gln
>WENV170078844
CDZV01041751
303954
Bacteroidota
GCC
Gly
>WENV170078916
CDZV01043695
338486
Bacteroidota
CAT
Met
>WENV170078942
CDZV01044362
411550
Bacteroidota
CTG
Gln
>WENV170078954
CDZV01044673
80614
Bacteroidota
>WENV170079024
CDZV01047453
303954
Bacteroidota
GCC
Gly
>WENV170079041
CDZV01048205
238121
Bacteroidota
CTT
Lys
>WENV170079066
CDZV01050419
52358
Bacteroidota
TGA
Ser
>WENV170079074
CDZV01050914
341950
Bacteroidota
>WENV170079089
CDZV01051699
415410
Bacteroidota
TTG
Gln
>WENV170079092
CDZV01051748
144657
Bacteroidota
CGG
Pro
>WENV170079107
CDZV01051877
235165
Bacteroidota
CCA
Trp
>WENV170079143
CDZV01053160
44852
Bacteroidota
TAA
Leu
>WENV170079147
CDZV01053578
144656
Bacteroidota
GTG
His
>WENV170079151
CDZV01054041
338165
Bacteroidota
GGT
Thr
>WENV170079171
CDZV01054993
301449
Bacteroidota
CGG
Pro
>WENV170079197
CDZV01055812
425638
Bacteroidota
CTG
Gln
>WENV170079215
CDZV01056739
419272
Bacteroidota
CTG
Gln
>WENV170079218
CDZV01056752
154643
Bacteroidota
CAT
Met
>WENV170079223
CDZV01056752
132360
Bacteroidota
GGG
Pro
>WENV170079231
CDZV01056768
238121
Bacteroidota
CTT
Lys
>WENV170079230
CDZV01056768
238121
Bacteroidota
CTT
Lys
>WENV170079229
CDZV01056768
238121
Bacteroidota
CTT
Lys
>WENV170079246
CDZV01057685
301449
Bacteroidota
CGG
Pro
>WENV170079303
CDZV01060497
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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