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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170101760
CEAR01046312
269918
Bacillota
CTT
Lys
>WENV170101761
CEAR01046312
269918
Bacillota
CTT
Lys
>WENV170101762
CEAR01046312
269918
Bacillota
CTT
Lys
>WENV170101763
CEAR01046312
269918
Bacillota
CTT
Lys
>WENV170101814
CEAR01048571
269918
Bacillota
CTT
Lys
>WENV170100808
CEAR01004997
229770
Bacillota
CCT
Arg
>WENV170100999
CEAR01014401
261392
Bacillota
GAA
Phe
>WENV170101055
CEAR01017248
261392
Bacillota
GAA
Phe
>WENV170101130
CEAR01021553
172175
Bacillota
GAC
Val
>WENV170100892
CEAR01010113
261394
Bacillota
CCG
Arg
>WENV170101924
CEAR01054313
19350
Bacillota
GCT
Ser
>WENV170100711
CEAR01001339
162485
Bacillota
CAT
Met
>WENV170101643
CEAR01040401
162485
Bacillota
CAT
Met
>WENV170101645
CEAR01040401
162485
Bacillota
CAT
Met
>WENV170100865
CEAR01007820
371229
Bacillota
CTG
Gln
>WENV170101782
CEAR01047161
369774
Bacillota
GGT
Thr
>WENV170101350
CEAR01030115
393129
Bacillota
CTC
Glu
>WENV170101658
CEAR01040891
393129
Bacillota
CTC
Glu
>WENV170101681
CEAR01041903
393129
Bacillota
CTC
Glu
>WENV170102034
CEAR01059947
393129
Bacillota
CTC
Glu
>WENV170100917
CEAR01011506
410090
Bacillota
GCC
Gly
>WENV170101671
CEAR01040911
410090
Bacillota
GCC
Gly
>WENV170100954
CEAR01012009
43034
Bacillota
TGA
Ser
>WENV170100689
CEAR01000894
159242
Bacillota
CCG
Arg
>WENV170100898
CEAR01010533
161902
Bacillota
CAT
Met
>WENV170101424
CEAR01031680
175232
Bacillota
CAT
Met
>WENV170101933
CEAR01055274
64854
Bacillota
TAA
Leu
>WENV170100853
CEAR01007577
448255
Bacillota
CTG
Gln
>WENV170101307
CEAR01028132
159234
Bacillota
CAC
Val
>WENV170101040
CEAR01016759
181889
Bacillota
>WENV170101478
CEAR01034099
143511
Bacillota
TGG
Pro
>WENV170101767
CEAR01046639
268483
Bacillota
CTT
Lys
>WENV170100832
CEAR01006717
162688
Bacillota
GAT
Ile
>WENV170101603
CEAR01038970
162688
Bacillota
GAT
Ile
>WENV170101921
CEAR01053876
162688
Bacillota
GAT
Ile
>WENV170101188
CEAR01023479
162487
Bacillota
CGG
Pro
>WENV170100906
CEAR01010741
106802
Bacillota
GTA
Tyr
>WENV170101156
CEAR01022058
106802
Bacillota
GTA
Tyr
>WENV170101354
CEAR01030165
106802
Bacillota
GTA
Tyr
>WENV170101981
CEAR01057643
47790
Bacillota
TGA
Ser
>WENV170100757
CEAR01003094
159237
Bacillota
TCT
Arg
>WENV170101961
CEAR01056136
90522
Bacillota
CAG
Leu
>WENV170101634
CEAR01039933
177383
Bacillota
CGG
Pro
>WENV170100746
CEAR01002714
374673
Bacillota
CTC
Glu
>WENV170100799
CEAR01004544
374673
Bacillota
CTC
Glu
>WENV170100965
CEAR01012499
374673
Bacillota
CTC
Glu
>WENV170100983
CEAR01013764
374673
Bacillota
CTC
Glu
>WENV170101068
CEAR01017618
374673
Bacillota
CTC
Glu
>WENV170101680
CEAR01041877
374673
Bacillota
CTC
Glu
>WENV170101697
CEAR01042333
374673
Bacillota
CTC
Glu
>WENV170101796
CEAR01047594
374673
Bacillota
CTC
Glu
>WENV170101841
CEAR01049576
374673
Bacillota
CTC
Glu
>WENV170101234
CEAR01025339
261284
Bacillota
CTT
Lys
>WENV170101622
CEAR01039538
371263
Bacillota
TTG
Gln
>WENV170102014
CEAR01058593
371263
Bacillota
TTG
Gln
>WENV170101050
CEAR01017017
158271
Bacillota
CCT
Arg
>WENV170101250
CEAR01025766
369393
Bacillota
TTC
Glu
>WENV170101758
CEAR01046185
224291
Bacillota
CCT
Arg
>WENV170100834
CEAR01006750
56553
Bacillota
CAG
Leu
>WENV170100835
CEAR01006750
56553
Bacillota
CAG
Leu
>WENV170101021
CEAR01015559
56553
Bacillota
CAG
Leu
>WENV170101302
CEAR01027719
50190
Bacillota
AAG
Leu
>WENV170101601
CEAR01038918
369390
Bacillota
TGT
Thr
>WENV170100968
CEAR01012891
271703
Bacillota
GTG
His
>WENV170100817
CEAR01005776
47066
Bacillota
TGA
Ser
>WENV170101029
CEAR01016245
277767
Bacillota
CGC
Ala
>WENV170101561
CEAR01037546
369776
Bacillota
CTG
Gln
>WENV170101287
CEAR01027225
49796
Bacillota
TGA
Ser
>WENV170101830
CEAR01049029
261393
Bacillota
CGT
Thr
>WENV170101209
CEAR01024410
162605
Bacillota
CCT
Arg
>WENV170100969
CEAR01012891
308738
Bacillota
TTG
Gln
>WENV170101908
CEAR01052598
448256
Bacillota
TTG
Gln
>WENV170101006
CEAR01014937
167205
Bacillota
TAC
Val
>WENV170101174
CEAR01022988
167205
Bacillota
TAC
Val
>WENV170101955
CEAR01055739
167205
Bacillota
TAC
Val
>WENV170101104
CEAR01019939
261310
Bacillota
CGT
Thr
>WENV170101187
CEAR01023475
452372
Bacillota
CCA
Trp
>WENV170101777
CEAR01046671
449102
Bacillota
CCA
Trp
>WENV170101484
CEAR01034190
18326
Bacillota
CGA
Ser
>WENV170101511
CEAR01035102
159236
Bacillota
GTT
Asn
>WENV170100848
CEAR01007191
257976
Bacillota
CCC
Gly
>WENV170101254
CEAR01026048
257976
Bacillota
CCC
Gly
>WENV170101784
CEAR01047172
162486
Bacillota
GAT
Ile
>WENV170101155
CEAR01022058
258131
Bacillota
TGT
Thr
>WENV170101353
CEAR01030165
258131
Bacillota
TGT
Thr
>WENV170101470
CEAR01034014
159239
Bacillota
CCT
Arg
>WENV170100756
CEAR01002798
89161
Bacillota
CAA
Leu
>WENV170101970
CEAR01056635
292274
Bacillota
TTT
Lys
>WENV170102004
CEAR01058518
257965
Bacillota
TGG
Pro
>WENV170100936
CEAR01011997
162488
Bacillota
TCT
Arg
>WENV170100758
CEAR01003094
159238
Bacillota
GTG
His
>WENV170101965
CEAR01056214
369391
Bacillota
TCC
Gly
>WENV170101783
CEAR01047172
131078
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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