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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170100757
CEAR01003094
144612
Bacillota
TCT
Arg
>WENV170101486
CEAR01034487
156189
Bacillota
GAT
Ile
>WENV170101438
CEAR01032703
235098
Bacillota
GAC
Val
>WENV170101287
CEAR01027225
44854
Bacillota
TGA
Ser
>WENV170101233
CEAR01025334
347827
Bacillota
TTC
Glu
>WENV170101848
CEAR01050508
59312
Bacillota
CAG
Leu
>WENV170102034
CEAR01059947
338147
Bacillota
CTC
Glu
>WENV170101681
CEAR01041903
338147
Bacillota
CTC
Glu
>WENV170101658
CEAR01040891
338147
Bacillota
CTC
Glu
>WENV170101350
CEAR01030115
338147
Bacillota
CTC
Glu
>WENV170102015
CEAR01058593
235114
Bacillota
TTT
Lys
>WENV170101302
CEAR01027719
44859
Bacillota
AAG
Leu
>WENV170101094
CEAR01019187
156937
Bacillota
GTG
His
>WENV170101353
CEAR01030165
274189
Bacillota
TGT
Thr
>WENV170101155
CEAR01022058
274189
Bacillota
TGT
Thr
>WENV170100905
CEAR01010741
274189
Bacillota
TGT
Thr
>WENV170100733
CEAR01002289
338149
Bacillota
CTC
Glu
>WENV170101424
CEAR01031680
144766
Bacillota
CAT
Met
>WENV170101981
CEAR01057643
37269
Bacillota
TGA
Ser
>WENV170100853
CEAR01007577
411547
Bacillota
CTG
Gln
>WENV170102027
CEAR01059482
263765
Bacillota
TAC
Val
>WENV170100786
CEAR01004463
263765
Bacillota
TAC
Val
>WENV170101908
CEAR01052598
411549
Bacillota
TTG
Gln
>WENV170101234
CEAR01025339
235142
Bacillota
CTT
Lys
>WENV170100689
CEAR01000894
148188
Bacillota
CCG
Arg
>WENV170101956
CEAR01055739
163943
Bacillota
GTC
Asp
>WENV170100751
CEAR01002714
163943
Bacillota
GTC
Asp
>WENV170102006
CEAR01058578
249522
Bacillota
TAC
Val
>WENV170101509
CEAR01035100
249522
Bacillota
TAC
Val
>WENV170100875
CEAR01008684
249522
Bacillota
TAC
Val
>WENV170102004
CEAR01058518
235124
Bacillota
TGG
Pro
>WENV170101601
CEAR01038918
338129
Bacillota
TGT
Thr
>WENV170101142
CEAR01021711
144583
Bacillota
ACG
Arg
>WENV170101511
CEAR01035102
144621
Bacillota
GTT
Asn
>WENV170101055
CEAR01017248
235113
Bacillota
GAA
Phe
>WENV170100999
CEAR01014401
235113
Bacillota
GAA
Phe
>WENV170101254
CEAR01026048
245296
Bacillota
CCC
Gly
>WENV170100848
CEAR01007191
245296
Bacillota
CCC
Gly
>WENV170101308
CEAR01028153
248965
Bacillota
GCC
Gly
>WENV170101176
CEAR01022988
248965
Bacillota
GCC
Gly
>WENV170101307
CEAR01028132
144594
Bacillota
CAC
Val
>WENV170101917
CEAR01053514
95563
Bacillota
GTA
Tyr
>WENV170101656
CEAR01040888
272488
Bacillota
GAA
Phe
>WENV170101598
CEAR01038856
238945
Bacillota
GCC
Gly
>WENV170101220
CEAR01024904
376360
Bacillota
GCA
Cys
>WENV170102051
CEAR01060473
338128
Bacillota
TTC
Glu
>WENV170101836
CEAR01049562
338128
Bacillota
TTC
Glu
>WENV170101250
CEAR01025766
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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