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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170110602
CECF01035741
235097
Bacteroidota
TTT
Lys
>WENV170110746
CECF01042677
235097
Bacteroidota
TTT
Lys
>WENV170110768
CECF01043406
235097
Bacteroidota
TTT
Lys
>WENV170110892
CECF01049977
235097
Bacteroidota
TTT
Lys
>WENV170111088
CECF01059495
235097
Bacteroidota
TTT
Lys
>WENV170111230
CECF01066355
235097
Bacteroidota
TTT
Lys
>WENV170111252
CECF01067323
235097
Bacteroidota
TTT
Lys
>WENV170110273
CECF01018553
235102
Bacteroidota
CGT
Thr
>WENV170110209
CECF01015894
267954
Bacteroidota
GCC
Gly
>WENV170110210
CECF01015894
267954
Bacteroidota
GCC
Gly
>WENV170110393
CECF01025507
144657
Bacteroidota
CGG
Pro
>WENV170110411
CECF01026080
144657
Bacteroidota
CGG
Pro
>WENV170109972
CECF01006068
243025
Bacteroidota
CAT
Met
>WENV170110814
CECF01045570
243025
Bacteroidota
CAT
Met
>WENV170111286
CECF01068998
126966
Bacteroidota
TAC
Val
>WENV170111287
CECF01068998
126966
Bacteroidota
TAC
Val
>WENV170109910
CECF01002790
343138
Bacteroidota
CCT
Arg
>WENV170110016
CECF01007117
58715
Bacteroidota
GAG
Leu
>WENV170109892
CECF01001881
17323
Bacteroidota
GGA
Ser
>WENV170110376
CECF01024386
338486
Bacteroidota
CAT
Met
>WENV170110365
CECF01023861
338486
Bacteroidota
CAT
Met
>WENV170110140
CECF01012547
338486
Bacteroidota
CAT
Met
>WENV170111102
CECF01060060
415410
Bacteroidota
TTG
Gln
>WENV170110079
CECF01009838
415410
Bacteroidota
TTG
Gln
>WENV170111074
CECF01058687
136244
Bacteroidota
TAC
Val
>WENV170111191
CECF01064568
59689
Bacteroidota
CAG
Leu
>WENV170110410
CECF01026078
128251
Bacteroidota
TGG
Pro
>WENV170110838
CECF01046237
344692
Bacteroidota
GGT
Thr
>WENV170110958
CECF01052404
353373
Bacteroidota
>WENV170110497
CECF01030937
341950
Bacteroidota
>WENV170111274
CECF01068533
341950
Bacteroidota
>WENV170111220
CECF01066221
338124
Bacteroidota
CCG
Arg
>WENV170110373
CECF01024230
338124
Bacteroidota
CCG
Arg
>WENV170109894
CECF01002029
338124
Bacteroidota
CCG
Arg
>WENV170110857
CECF01047775
235203
Bacteroidota
TTT
Lys
>WENV170110648
CECF01037526
235203
Bacteroidota
TTT
Lys
>WENV170109886
CECF01001601
235203
Bacteroidota
TTT
Lys
>WENV170110851
CECF01047561
238121
Bacteroidota
CTT
Lys
>WENV170110539
CECF01032525
238121
Bacteroidota
CTT
Lys
>WENV170110538
CECF01032525
238121
Bacteroidota
CTT
Lys
>WENV170110240
CECF01016962
238121
Bacteroidota
CTT
Lys
>WENV170110239
CECF01016962
238121
Bacteroidota
CTT
Lys
>WENV170110238
CECF01016962
238121
Bacteroidota
CTT
Lys
>WENV170109853
CECF01000075
126641
Bacteroidota
TAC
Val
>WENV170111153
CECF01062930
338132
Bacteroidota
GCA
Cys
>WENV170110617
CECF01036169
338132
Bacteroidota
GCA
Cys
>WENV170110474
CECF01030164
338132
Bacteroidota
GCA
Cys
>WENV170110443
CECF01027575
338132
Bacteroidota
GCA
Cys
>WENV170110261
CECF01018140
338132
Bacteroidota
GCA
Cys
>WENV170109900
CECF01002198
338132
Bacteroidota
GCA
Cys
>WENV170110241
CECF01016962
45423
Bacteroidota
TGA
Ser
>WENV170110413
CECF01026088
58714
Bacteroidota
CAA
Leu
>WENV170111076
CECF01058718
280660
Bacteroidota
CCA
Trp
>WENV170110203
CECF01015844
144933
Bacteroidota
TCT
Arg
>WENV170109855
CECF01000200
251266
Bacteroidota
CTT
Lys
>WENV170109975
CECF01006096
136207
Bacteroidota
TAC
Val
>WENV170109974
CECF01006096
136207
Bacteroidota
TAC
Val
>WENV170109941
CECF01003894
136207
Bacteroidota
TAC
Val
>WENV170109940
CECF01003894
136207
Bacteroidota
TAC
Val
>WENV170109939
CECF01003894
136207
Bacteroidota
TAC
Val
>WENV170111157
CECF01063342
144656
Bacteroidota
GTG
His
>WENV170110839
CECF01046600
144656
Bacteroidota
GTG
His
>WENV170111232
CECF01066677
235207
Bacteroidota
CAT
Met
>WENV170110917
CECF01051077
235207
Bacteroidota
CAT
Met
>WENV170110328
CECF01021725
235207
Bacteroidota
CAT
Met
>WENV170110787
CECF01044566
144659
Bacteroidota
GTG
His
>WENV170110786
CECF01044566
144659
Bacteroidota
GTG
His
>WENV170110643
CECF01037517
144659
Bacteroidota
GTG
His
>WENV170110394
CECF01025507
235180
Bacteroidota
CCA
Trp
>WENV170110694
CECF01039647
80607
Bacteroidota
GTA
Tyr
>WENV170110693
CECF01039646
80607
Bacteroidota
GTA
Tyr
>WENV170110190
CECF01015268
80607
Bacteroidota
GTA
Tyr
>WENV170110578
CECF01034047
113604
Bacteroidota
>WENV170110576
CECF01034047
113604
Bacteroidota
>WENV170110319
CECF01021126
113604
Bacteroidota
>WENV170110234
CECF01016948
113604
Bacteroidota
>WENV170111090
CECF01059501
80614
Bacteroidota
>WENV170111001
CECF01055012
80614
Bacteroidota
>WENV170110642
CECF01037517
80614
Bacteroidota
>WENV170110640
CECF01037514
80614
Bacteroidota
>WENV170109959
CECF01005478
80614
Bacteroidota
>WENV170111156
CECF01063295
52358
Bacteroidota
TGA
Ser
>WENV170111106
CECF01060626
52358
Bacteroidota
TGA
Ser
>WENV170110629
CECF01037125
52358
Bacteroidota
TGA
Ser
>WENV170111050
CECF01057491
154643
Bacteroidota
CAT
Met
>WENV170110725
CECF01041263
154643
Bacteroidota
CAT
Met
>WENV170110998
CECF01054916
144590
Bacteroidota
GTT
Asn
>WENV170110997
CECF01054916
144590
Bacteroidota
GTT
Asn
>WENV170110996
CECF01054916
144590
Bacteroidota
GTT
Asn
>WENV170110804
CECF01045034
95559
Bacteroidota
TAG
Leu
>WENV170110594
CECF01035310
95559
Bacteroidota
TAG
Leu
>WENV170110379
CECF01024421
419272
Bacteroidota
CTG
Gln
>WENV170111151
CECF01062885
144655
Bacteroidota
GGC
Ala
>WENV170110625
CECF01037056
144655
Bacteroidota
GGC
Ala
>WENV170110494
CECF01030865
144639
Bacteroidota
GGC
Ala
>WENV170109909
CECF01002790
338164
Bacteroidota
TTC
Glu
>WENV170109908
CECF01002790
338164
Bacteroidota
TTC
Glu
>WENV170111010
CECF01055495
95875
Bacteroidota
TAG
Leu
>WENV170110925
CECF01051166
95875
Bacteroidota
TAG
Leu
>WENV170110734
CECF01041812
240012
Bacteroidota
CCC
Gly
>WENV170110561
CECF01033522
240012
Bacteroidota
CCC
Gly
>WENV170111123
CECF01061720
44852
Bacteroidota
TAA
Leu
>WENV170111021
CECF01056058
147439
Bacteroidota
TCT
Arg
>WENV170110166
CECF01013304
147439
Bacteroidota
TCT
Arg
>WENV170110547
CECF01032670
280513
Bacteroidota
TTT
Lys
>WENV170110480
CECF01030286
132360
Bacteroidota
GGG
Pro
>WENV170110217
CECF01015939
132360
Bacteroidota
GGG
Pro
>WENV170111150
CECF01062861
425638
Bacteroidota
CTG
Gln
>WENV170110983
CECF01053905
425638
Bacteroidota
CTG
Gln
>WENV170110528
CECF01032505
425638
Bacteroidota
CTG
Gln
>WENV170110197
CECF01015368
425638
Bacteroidota
CTG
Gln
>WENV170110587
CECF01034750
239647
Bacteroidota
TTT
Lys
>WENV170111024
CECF01056062
353927
Bacteroidota
TTC
Glu
>WENV170111023
CECF01056062
353927
Bacteroidota
TTC
Glu
>WENV170110456
CECF01028271
353927
Bacteroidota
TTC
Glu
>WENV170110412
CECF01026085
185921
Bacteroidota
GTC
Asp
>WENV170110220
CECF01016411
185921
Bacteroidota
GTC
Asp
>WENV170110742
CECF01042348
23696
Bacteroidota
GCT
Ser
>WENV170110322
CECF01021236
414426
Bacteroidota
CTG
Gln
>WENV170110161
CECF01013107
48914
Bacteroidota
TGA
Ser
>WENV170111204
CECF01065134
16224
Bacteroidota
GGA
Ser
>WENV170110926
CECF01051676
16220
Bacteroidota
GGA
Ser
>WENV170110264
CECF01018155
16220
Bacteroidota
GGA
Ser
>WENV170110263
CECF01018152
16220
Bacteroidota
GGA
Ser
>WENV170110821
CECF01046075
338125
Bacteroidota
CCT
Arg
>WENV170110503
CECF01030967
235129
Bacteroidota
GCC
Gly
>WENV170110109
CECF01010718
235129
Bacteroidota
GCC
Gly
>WENV170110107
CECF01010718
235129
Bacteroidota
GCC
Gly
>WENV170110014
CECF01007117
235129
Bacteroidota
GCC
Gly
>WENV170110549
CECF01033044
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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