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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170125820
CENP01069562
260225
Alphaproteobacteria
GTT
Asn
>WENV170124776
CENP01007437
396582
Alphaproteobacteria
GAC
Val
>WENV170127593
CENP01224758
268994
Alphaproteobacteria
CCA
Trp
>WENV170128105
CENP01338655
26825
Alphaproteobacteria
GGA
Ser
>WENV170126485
CENP01120664
259585
Alphaproteobacteria
CCA
Trp
>WENV170126690
CENP01143017
259585
Alphaproteobacteria
CCA
Trp
>WENV170125617
CENP01057750
393349
Alphaproteobacteria
GGT
Thr
>WENV170126633
CENP01134641
393349
Alphaproteobacteria
GGT
Thr
>WENV170124766
CENP01007204
225356
Alphaproteobacteria
GTG
His
>WENV170125187
CENP01031935
263684
Alphaproteobacteria
TTT
Lys
>WENV170126596
CENP01130573
114680
Alphaproteobacteria
TAG
Leu
>WENV170125267
CENP01037054
278841
Alphaproteobacteria
TTT
Lys
>WENV170125578
CENP01055455
278841
Alphaproteobacteria
TTT
Lys
>WENV170126237
CENP01100521
278841
Alphaproteobacteria
TTT
Lys
>WENV170126752
CENP01147903
278841
Alphaproteobacteria
TTT
Lys
>WENV170125460
CENP01047696
29052
Alphaproteobacteria
GGA
Ser
>WENV170127068
CENP01181150
371034
Alphaproteobacteria
GAC
Val
>WENV170127208
CENP01193911
371034
Alphaproteobacteria
GAC
Val
>WENV170127356
CENP01207127
371034
Alphaproteobacteria
GAC
Val
>WENV170127511
CENP01217388
371034
Alphaproteobacteria
GAC
Val
>WENV170127625
CENP01226854
371034
Alphaproteobacteria
GAC
Val
>WENV170127482
CENP01215760
178940
Alphaproteobacteria
GGG
Pro
>WENV170127610
CENP01226145
302408
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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