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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170126485
CENP01120664
267922
Alphaproteobacteria
CCA
Trp
>WENV170126690
CENP01143017
267922
Alphaproteobacteria
CCA
Trp
>WENV170127593
CENP01224758
267922
Alphaproteobacteria
CCA
Trp
>WENV170124752
CENP01006501
113700
Alphaproteobacteria
>WENV170124766
CENP01007204
184120
Alphaproteobacteria
GTG
His
>WENV170127021
CENP01176893
282595
Alphaproteobacteria
CCA
Trp
>WENV170127117
CENP01186148
339454
Alphaproteobacteria
>WENV170125744
CENP01065157
345376
Alphaproteobacteria
GAC
Val
>WENV170125840
CENP01071113
249928
Alphaproteobacteria
TAC
Val
>WENV170125460
CENP01047696
27877
Alphaproteobacteria
GGA
Ser
>WENV170127482
CENP01215760
163860
Alphaproteobacteria
GGG
Pro
>WENV170125907
CENP01075803
370641
Alphaproteobacteria
GCC
Gly
>WENV170126779
CENP01150069
279830
Alphaproteobacteria
TAC
Val
>WENV170126752
CENP01147903
266073
Alphaproteobacteria
TTT
Lys
>WENV170126237
CENP01100521
266073
Alphaproteobacteria
TTT
Lys
>WENV170125578
CENP01055455
266073
Alphaproteobacteria
TTT
Lys
>WENV170125267
CENP01037054
266073
Alphaproteobacteria
TTT
Lys
>WENV170125187
CENP01031935
266073
Alphaproteobacteria
TTT
Lys
>WENV170128149
CENP01367803
369678
Alphaproteobacteria
GGT
Thr
>WENV170126489
CENP01121150
235430
Alphaproteobacteria
TTT
Lys
>WENV170126332
CENP01107714
235430
Alphaproteobacteria
TTT
Lys
>WENV170126550
CENP01126191
152248
Alphaproteobacteria
TGG
Pro
>WENV170126640
CENP01135726
180581
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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