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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170191804
CEPD01064189
183605
Gammaproteobacteria
CCG
Arg
>WENV170191222
CEPD01000356
283840
Gammaproteobacteria
TTC
Glu
>WENV170191606
CEPD01039605
149035
Gammaproteobacteria
CCG
Arg
>WENV170191378
CEPD01013251
199984
Gammaproteobacteria
CAT
Met
>WENV170191533
CEPD01031300
199984
Gammaproteobacteria
CAT
Met
>WENV170192059
CEPD01126410
236013
Gammaproteobacteria
TGC
Ala
>WENV170191327
CEPD01009025
160030
Gammaproteobacteria
GGG
Pro
>WENV170191384
CEPD01013780
160030
Gammaproteobacteria
GGG
Pro
>WENV170191253
CEPD01002933
45109
Gammaproteobacteria
GGA
Ser
>WENV170191772
CEPD01059803
147114
Gammaproteobacteria
CCT
Arg
>WENV170191792
CEPD01063215
59172
Gammaproteobacteria
CAA
Leu
>WENV170191478
CEPD01024674
149036
Gammaproteobacteria
CCA
Trp
>WENV170191603
CEPD01038529
145261
Gammaproteobacteria
CAT
Met
>WENV170192029
CEPD01118717
149038
Gammaproteobacteria
TGG
Pro
>WENV170191394
CEPD01014441
240084
Gammaproteobacteria
GGT
Thr
>WENV170191266
CEPD01004262
147111
Gammaproteobacteria
CCG
Arg
>WENV170191547
CEPD01032786
268812
Gammaproteobacteria
GTT
Asn
>WENV170191891
CEPD01074829
113688
Gammaproteobacteria
GTA
Tyr
>WENV170191797
CEPD01063808
16396
Gammaproteobacteria
TGA
Ser
>WENV170191653
CEPD01045440
151889
Gammaproteobacteria
CAT
Met
>WENV170191819
CEPD01066066
146807
Gammaproteobacteria
TCT
Arg
>WENV170191359
CEPD01011306
147120
Gammaproteobacteria
CGG
Pro
>WENV170191669
CEPD01046885
149037
Gammaproteobacteria
GAC
Val
>WENV170191544
CEPD01032443
147112
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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