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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170232647
CEQI01086440
448974
Gammaproteobacteria
GCA
Cys
>WENV170232176
CEQI01033065
256881
Gammaproteobacteria
GTG
His
>WENV170231906
CEQI01006172
466478
Gammaproteobacteria
GCA
Cys
>WENV170231854
CEQI01001562
448854
Gammaproteobacteria
CCC
Gly
>WENV170232489
CEQI01064703
160668
Gammaproteobacteria
CAT
Met
>WENV170232047
CEQI01018231
221435
Gammaproteobacteria
GGG
Pro
>WENV170232707
CEQI01092821
260947
Gammaproteobacteria
TTG
Gln
>WENV170232031
CEQI01016617
18561
Gammaproteobacteria
TGA
Ser
>WENV170232786
CEQI01099621
105723
Gammaproteobacteria
GAG
Leu
>WENV170233068
CEQI01207356
65163
Gammaproteobacteria
CAA
Leu
>WENV170231953
CEQI01008518
285013
Gammaproteobacteria
GGT
Thr
>WENV170232383
CEQI01055092
164285
Gammaproteobacteria
TCG
Arg
>WENV170231951
CEQI01008518
124716
Gammaproteobacteria
GTA
Tyr
>WENV170232347
CEQI01052455
189269
Gammaproteobacteria
CGG
Pro
>WENV170231935
CEQI01006908
214281
Gammaproteobacteria
ACG
Arg
>WENV170232342
CEQI01052077
324336
Gammaproteobacteria
GTG
His
>WENV170232012
CEQI01013980
258828
Gammaproteobacteria
TGT
Thr
>WENV170232839
CEQI01104587
161319
Gammaproteobacteria
>WENV170232362
CEQI01053653
65858
Gammaproteobacteria
CAA
Leu
>WENV170232056
CEQI01019331
307388
Gammaproteobacteria
GCC
Gly
>WENV170232174
CEQI01033033
265381
Gammaproteobacteria
GTT
Asn
>WENV170232809
CEQI01100606
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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