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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170274430
CERM01017212
65227
Bacteroidota
TAA
Leu
>WENV170274238
CERM01005789
117444
Bacteroidota
GTA
Tyr
>WENV170274259
CERM01006499
117444
Bacteroidota
GTA
Tyr
>WENV170274389
CERM01013996
117444
Bacteroidota
GTA
Tyr
>WENV170274552
CERM01024463
117444
Bacteroidota
GTA
Tyr
>WENV170274243
CERM01005871
168329
Bacteroidota
CAT
Met
>WENV170274244
CERM01005871
292540
Bacteroidota
TCC
Gly
>WENV170274553
CERM01024463
292540
Bacteroidota
TCC
Gly
>WENV170275117
CERM01066486
165596
Bacteroidota
GGC
Ala
>WENV170275379
CERM01081023
165596
Bacteroidota
GGC
Ala
>WENV170274335
CERM01010814
69105
Bacteroidota
GCT
Ser
>WENV170274693
CERM01035579
108977
Bacteroidota
TAG
Leu
>WENV170274872
CERM01047706
109317
Bacteroidota
CAA
Leu
>WENV170275089
CERM01064350
461415
Bacteroidota
CCA
Trp
>WENV170275130
CERM01067767
105453
Bacteroidota
TAG
Leu
>WENV170274591
CERM01027726
213847
Bacteroidota
GTT
Asn
>WENV170275735
CERM01198061
161477
Bacteroidota
CAT
Met
>WENV170274559
CERM01025079
266737
Bacteroidota
TTT
Lys
>WENV170274421
CERM01016647
220163
Bacteroidota
TCT
Arg
>WENV170275291
CERM01078223
220163
Bacteroidota
TCT
Arg
>WENV170274728
CERM01038052
449969
Bacteroidota
GCA
Cys
>WENV170274123
CERM01000312
258742
Bacteroidota
TTT
Lys
>WENV170274745
CERM01038830
258742
Bacteroidota
TTT
Lys
>WENV170274673
CERM01034198
138923
Bacteroidota
TAC
Val
>WENV170274569
CERM01025810
149891
Bacteroidota
TGG
Pro
>WENV170274385
CERM01013769
57357
Bacteroidota
TGA
Ser
>WENV170274207
CERM01004083
160349
Bacteroidota
GTG
His
>WENV170274639
CERM01030856
160349
Bacteroidota
GTG
His
>WENV170274188
CERM01003507
311209
Bacteroidota
TTG
Gln
>WENV170274952
CERM01054230
311209
Bacteroidota
TTG
Gln
>WENV170276013
CERM01241613
456030
Bacteroidota
CCA
Trp
>WENV170275008
CERM01057962
258133
Bacteroidota
>WENV170274424
CERM01016747
385890
Bacteroidota
TTC
Glu
>WENV170274340
CERM01011253
448301
Bacteroidota
>WENV170275363
CERM01080875
448301
Bacteroidota
>WENV170274157
CERM01002000
310696
Bacteroidota
CCA
Trp
>WENV170274241
CERM01005789
310696
Bacteroidota
CCA
Trp
>WENV170274392
CERM01013996
310696
Bacteroidota
CCA
Trp
>WENV170275865
CERM01224752
448855
Bacteroidota
GCA
Cys
>WENV170275184
CERM01071205
105706
Bacteroidota
TAG
Leu
>WENV170274248
CERM01005971
138967
Bacteroidota
TGG
Pro
>WENV170274616
CERM01029634
51032
Bacteroidota
TGA
Ser
>WENV170274362
CERM01012379
149778
Bacteroidota
TAC
Val
>WENV170274450
CERM01018147
260955
Bacteroidota
TTG
Gln
>WENV170274282
CERM01008483
197208
Bacteroidota
GTT
Asn
>WENV170274311
CERM01009876
144149
Bacteroidota
TGG
Pro
>WENV170274764
CERM01039689
144149
Bacteroidota
TGG
Pro
>WENV170275825
CERM01217780
257840
Bacteroidota
>WENV170274329
CERM01010477
372822
Bacteroidota
GCC
Gly
>WENV170275383
CERM01081030
267059
Bacteroidota
GAA
Phe
>WENV170274240
CERM01005789
373542
Bacteroidota
GGT
Thr
>WENV170275146
CERM01068632
261335
Bacteroidota
TTT
Lys
>WENV170274663
CERM01033408
202999
Bacteroidota
TCG
Arg
>WENV170274411
CERM01015868
369841
Bacteroidota
>WENV170274621
CERM01030019
168483
Bacteroidota
GTT
Asn
>WENV170274511
CERM01021187
139749
Bacteroidota
TAC
Val
>WENV170275260
CERM01076491
22472
Bacteroidota
GGA
Ser
>WENV170274703
CERM01035933
310118
Bacteroidota
CCA
Trp
>WENV170275095
CERM01064992
310118
Bacteroidota
CCA
Trp
>WENV170275308
CERM01079264
259269
Bacteroidota
GAA
Phe
>WENV170274257
CERM01006343
452385
Bacteroidota
GCA
Cys
>WENV170274277
CERM01008099
23145
Bacteroidota
GGA
Ser
>WENV170274429
CERM01017212
398998
Bacteroidota
GCC
Gly
>WENV170274279
CERM01008342
158985
Bacteroidota
GTC
Asp
>WENV170275169
CERM01070391
311172
Bacteroidota
GAA
Phe
>WENV170274986
CERM01056526
158515
Bacteroidota
GTT
Asn
>WENV170275364
CERM01080875
178785
Bacteroidota
>WENV170274345
CERM01011506
179763
Bacteroidota
GTG
His
>WENV170274452
CERM01018155
179763
Bacteroidota
GTG
His
>WENV170275985
CERM01240448
390361
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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