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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170274243
CERM01005871
146962
Bacteroidota
CAT
Met
>WENV170274559
CERM01025079
236929
Bacteroidota
TTT
Lys
>WENV170274750
CERM01039281
165001
Bacteroidota
GTT
Asn
>WENV170274311
CERM01009876
139286
Bacteroidota
TGG
Pro
>WENV170274764
CERM01039689
139286
Bacteroidota
TGG
Pro
>WENV170275008
CERM01057962
238765
Bacteroidota
GCC
Gly
>WENV170274569
CERM01025810
126691
Bacteroidota
TGG
Pro
>WENV170274745
CERM01038830
309582
Bacteroidota
TTT
Lys
>WENV170274123
CERM01000312
309582
Bacteroidota
TTT
Lys
>WENV170274335
CERM01010814
59355
Bacteroidota
GCT
Ser
>WENV170274279
CERM01008342
172532
Bacteroidota
GTC
Asp
>WENV170275130
CERM01067767
103881
Bacteroidota
TAG
Leu
>WENV170275187
CERM01071438
154388
Bacteroidota
GTG
His
>WENV170275294
CERM01078461
338625
Bacteroidota
TTC
Glu
>WENV170274688
CERM01035413
338625
Bacteroidota
TTC
Glu
>WENV170275169
CERM01070391
236125
Bacteroidota
GAA
Phe
>WENV170274741
CERM01038504
364423
Bacteroidota
GGT
Thr
>WENV170274259
CERM01006499
95728
Bacteroidota
GTA
Tyr
>WENV170274552
CERM01024463
96418
Bacteroidota
GTA
Tyr
>WENV170275158
CERM01069591
150103
Bacteroidota
GTG
His
>WENV170274248
CERM01005971
127288
Bacteroidota
TGG
Pro
>WENV170274710
CERM01036372
127414
Bacteroidota
TGG
Pro
>WENV170275066
CERM01062931
238764
Bacteroidota
>WENV170274621
CERM01030019
190649
Bacteroidota
GTT
Asn
>WENV170274429
CERM01017212
341598
Bacteroidota
GCC
Gly
>WENV170274385
CERM01013769
44938
Bacteroidota
TGA
Ser
>WENV170275260
CERM01076491
17987
Bacteroidota
GGA
Ser
>WENV170275985
CERM01240448
382385
Bacteroidota
CCT
Arg
>WENV170274277
CERM01008099
17496
Bacteroidota
GGA
Ser
>WENV170274411
CERM01015868
341187
Bacteroidota
TTG
Gln
>WENV170274553
CERM01024463
309421
Bacteroidota
TCC
Gly
>WENV170274244
CERM01005871
309421
Bacteroidota
TCC
Gly
>WENV170274872
CERM01047706
97383
Bacteroidota
CAA
Leu
>WENV170274430
CERM01017212
58832
Bacteroidota
TAA
Leu
>WENV170274362
CERM01012379
136274
Bacteroidota
TAC
Val
>WENV170275220
CERM01074425
145555
Bacteroidota
GTC
Asp
>WENV170274334
CERM01010788
145555
Bacteroidota
GTC
Asp
>WENV170275291
CERM01078223
145507
Bacteroidota
TCT
Arg
>WENV170274421
CERM01016647
145507
Bacteroidota
TCT
Arg
>WENV170275308
CERM01079264
235746
Bacteroidota
GAA
Phe
>WENV170274329
CERM01010477
342807
Bacteroidota
GCC
Gly
>WENV170274337
CERM01010866
127449
Bacteroidota
TAC
Val
>WENV170275092
CERM01064752
193473
Bacteroidota
GTC
Asp
>WENV170274689
CERM01035437
193473
Bacteroidota
GTC
Asp
>WENV170274618
CERM01029821
193473
Bacteroidota
GTC
Asp
>WENV170274389
CERM01013996
101289
Bacteroidota
GTA
Tyr
>WENV170274238
CERM01005789
101289
Bacteroidota
GTA
Tyr
>WENV170274765
CERM01039758
127216
Bacteroidota
GGG
Pro
>WENV170274742
CERM01038696
127216
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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