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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170334646
CESY01283501
237493
Alphaproteobacteria
CCA
Trp
>WENV170334267
CESY01152586
58865
Alphaproteobacteria
GAG
Leu
>WENV170334004
CESY01117756
193550
Alphaproteobacteria
TCT
Arg
>WENV170334564
CESY01255030
16408
Alphaproteobacteria
GGA
Ser
>WENV170333468
CESY01048918
147577
Alphaproteobacteria
CCG
Arg
>WENV170334284
CESY01155182
162801
Alphaproteobacteria
GTG
His
>WENV170333028
CESY01000044
82652
Alphaproteobacteria
GTA
Tyr
>WENV170333516
CESY01054992
258175
Alphaproteobacteria
CGC
Ala
>WENV170333978
CESY01115179
254522
Alphaproteobacteria
GAA
Phe
>WENV170333708
CESY01079383
65244
Alphaproteobacteria
CAG
Leu
>WENV170333123
CESY01008458
160158
Alphaproteobacteria
GAT
Ile
>WENV170334497
CESY01225395
412281
Alphaproteobacteria
CTG
Gln
>WENV170333987
CESY01115517
174413
Alphaproteobacteria
CAT
Met
>WENV170333935
CESY01107993
185506
Alphaproteobacteria
CAT
Met
>WENV170333672
CESY01074894
193837
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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