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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170339884
CETB01166928
411784
Bacteroidota
GCA
Cys
>WENV170340179
CETB01260522
236929
Bacteroidota
TTT
Lys
>WENV170338706
CETB01053643
165001
Bacteroidota
GTT
Asn
>WENV170339078
CETB01089406
306609
Bacteroidota
GAA
Phe
>WENV170338557
CETB01041385
416430
Bacteroidota
GCA
Cys
>WENV170338861
CETB01067503
361294
Bacteroidota
GGT
Thr
>WENV170340404
CETB01349464
126691
Bacteroidota
TGG
Pro
>WENV170339715
CETB01154740
294483
Bacteroidota
TTT
Lys
>WENV170340041
CETB01172413
172532
Bacteroidota
GTC
Asp
>WENV170338267
CETB01018341
172532
Bacteroidota
GTC
Asp
>WENV170338184
CETB01010999
103881
Bacteroidota
TAG
Leu
>WENV170339435
CETB01127833
338625
Bacteroidota
TTC
Glu
>WENV170338481
CETB01035452
338625
Bacteroidota
TTC
Glu
>WENV170338175
CETB01009955
338625
Bacteroidota
TTC
Glu
>WENV170338174
CETB01009955
338625
Bacteroidota
TTC
Glu
>WENV170338769
CETB01059862
236125
Bacteroidota
GAA
Phe
>WENV170339000
CETB01082920
273242
Bacteroidota
CCA
Trp
>WENV170339047
CETB01086478
322068
Bacteroidota
TCC
Gly
>WENV170338833
CETB01064841
322068
Bacteroidota
TCC
Gly
>WENV170338386
CETB01028281
322068
Bacteroidota
TCC
Gly
>WENV170338879
CETB01069424
127414
Bacteroidota
TGG
Pro
>WENV170340420
CETB01351853
171336
Bacteroidota
GGC
Ala
>WENV170339671
CETB01150606
320640
Bacteroidota
TTG
Gln
>WENV170339454
CETB01129558
320640
Bacteroidota
TTG
Gln
>WENV170338536
CETB01040091
320640
Bacteroidota
TTG
Gln
>WENV170338079
CETB01002180
259147
Bacteroidota
TTT
Lys
>WENV170338624
CETB01046906
290994
Bacteroidota
CAT
Met
>WENV170338340
CETB01023691
148135
Bacteroidota
GGG
Pro
>WENV170339852
CETB01164662
193627
Bacteroidota
TCT
Arg
>WENV170339186
CETB01100643
193627
Bacteroidota
TCT
Arg
>WENV170339048
CETB01086478
342872
Bacteroidota
GGT
Thr
>WENV170339071
CETB01088418
165044
Bacteroidota
GTG
His
>WENV170338458
CETB01034088
21340
Bacteroidota
GGA
Ser
>WENV170339840
CETB01163703
145555
Bacteroidota
GTC
Asp
>WENV170339314
CETB01114379
145555
Bacteroidota
GTC
Asp
>WENV170338758
CETB01059197
145555
Bacteroidota
GTC
Asp
>WENV170339809
CETB01161062
240901
Bacteroidota
TTT
Lys
>WENV170338162
CETB01008690
240901
Bacteroidota
TTT
Lys
>WENV170338161
CETB01008690
240901
Bacteroidota
TTT
Lys
>WENV170338284
CETB01019423
255845
Bacteroidota
>WENV170339303
CETB01113388
148047
Bacteroidota
CAT
Met
>WENV170339886
CETB01167118
193473
Bacteroidota
GTC
Asp
>WENV170339876
CETB01166507
110457
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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