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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170372861
CETS01141550
183605
Gammaproteobacteria
CCG
Arg
>WENV170373496
CETS01294689
338234
Gammaproteobacteria
GAC
Val
>WENV170373158
CETS01185237
152460
Gammaproteobacteria
GGG
Pro
>WENV170373500
CETS01294765
144810
Gammaproteobacteria
TCG
Arg
>WENV170371799
CETS01040506
235341
Gammaproteobacteria
TGT
Thr
>WENV170372592
CETS01113792
58822
Gammaproteobacteria
CAA
Leu
>WENV170372874
CETS01143210
47425
Gammaproteobacteria
GGA
Ser
>WENV170372281
CETS01079664
23369
Gammaproteobacteria
GCT
Ser
>WENV170373271
CETS01234323
145196
Gammaproteobacteria
CAT
Met
>WENV170372724
CETS01128639
197713
Gammaproteobacteria
CAT
Met
>WENV170371446
CETS01011384
185163
Gammaproteobacteria
ACG
Arg
>WENV170373096
CETS01161451
181949
Gammaproteobacteria
CAT
Met
>WENV170371808
CETS01040865
240619
Gammaproteobacteria
TGT
Thr
>WENV170372896
CETS01145403
149036
Gammaproteobacteria
CCA
Trp
>WENV170373023
CETS01157835
44873
Gammaproteobacteria
TGA
Ser
>WENV170371492
CETS01015618
202944
Gammaproteobacteria
TGG
Pro
>WENV170371479
CETS01014361
199268
Gammaproteobacteria
ACG
Arg
>WENV170371478
CETS01014361
199268
Gammaproteobacteria
ACG
Arg
>WENV170371802
CETS01040506
235344
Gammaproteobacteria
GGT
Thr
>WENV170371946
CETS01051627
235339
Gammaproteobacteria
GTG
His
>WENV170371702
CETS01031489
269152
Gammaproteobacteria
GTG
His
>WENV170371947
CETS01051627
106361
Gammaproteobacteria
TAG
Leu
>WENV170372928
CETS01148321
241136
Gammaproteobacteria
TTG
Gln
>WENV170371755
CETS01036687
250885
Gammaproteobacteria
TGC
Ala
>WENV170371697
CETS01031300
195303
Gammaproteobacteria
GAT
Ile
>WENV170372449
CETS01097501
59460
Gammaproteobacteria
CAA
Leu
>WENV170372538
CETS01108227
59658
Gammaproteobacteria
CAA
Leu
>WENV170372027
CETS01058826
147120
Gammaproteobacteria
CGG
Pro
>WENV170373231
CETS01221109
182592
Gammaproteobacteria
GAC
Val
>WENV170372540
CETS01108451
251608
Gammaproteobacteria
GAA
Phe
>WENV170372364
CETS01088954
147117
Gammaproteobacteria
GTC
Asp
>WENV170372238
CETS01074979
276263
Gammaproteobacteria
TGC
Ala
>WENV170373524
CETS01295902
144813
Gammaproteobacteria
CCT
Arg
>WENV170372156
CETS01068803
173617
Gammaproteobacteria
GTC
Asp
>WENV170371945
CETS01051627
175414
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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