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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170540263
CWGX01000053
206829
Actinomycetota
>WENV170540229
CWGX01000016
211952
Actinomycetota
ACG
Arg
>WENV170540230
CWGX01000016
158688
Actinomycetota
ACG
Arg
>WENV170540234
CWGX01000023
238709
Actinomycetota
CAA
Leu
>WENV170540226
CWGX01000012
257344
Actinomycetota
CAC
Val
>WENV170540241
CWGX01000035
257344
Actinomycetota
CAC
Val
>WENV170540254
CWGX01000041
158694
Actinomycetota
CAT
Met
>WENV170540235
CWGX01000025
469498
Actinomycetota
CCC
Gly
>WENV170540247
CWGX01000038
258011
Actinomycetota
CCG
Arg
>WENV170540216
CWGX01000002
257317
Actinomycetota
CCT
Arg
>WENV170540256
CWGX01000041
49727
Actinomycetota
CGA
Ser
>WENV170540242
CWGX01000036
218329
Actinomycetota
CTT
Lys
>WENV170540225
CWGX01000011
18267
Actinomycetota
GAG
Leu
>WENV170540255
CWGX01000041
18582
Actinomycetota
GCT
Ser
>WENV170540228
CWGX01000012
169995
Actinomycetota
GGG
Pro
>WENV170540233
CWGX01000023
124775
Actinomycetota
TAA
Leu
>WENV170540239
CWGX01000035
124776
Actinomycetota
TAG
Leu
>WENV170540218
CWGX01000005
471398
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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