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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170568889
FLMP01093278
226114
Actinomycetota
>WENV170569131
FLMP01130137
263488
Actinomycetota
ACG
Arg
>WENV170568984
FLMP01105650
194311
Actinomycetota
CAT
Met
>WENV170567570
FLMP01001948
230166
Actinomycetota
CAT
Met
>WENV170568244
FLMP01024744
448107
Actinomycetota
CCC
Gly
>WENV170568223
FLMP01023028
316758
Actinomycetota
CCG
Arg
>WENV170568054
FLMP01014636
27080
Actinomycetota
CGA
Ser
>WENV170567506
FLMP01001249
377409
Actinomycetota
CTG
Gln
>WENV170567809
FLMP01006077
267530
Actinomycetota
CTT
Lys
>WENV170569691
FLMP01271050
267530
Actinomycetota
CTT
Lys
>WENV170567424
FLMP01000425
405834
Actinomycetota
GAC
Val
>WENV170567522
FLMP01001513
206225
Actinomycetota
GAT
Ile
>WENV170568343
FLMP01031418
236280
Actinomycetota
GAT
Ile
>WENV170568452
FLMP01041035
50395
Actinomycetota
GGA
Ser
>WENV170567569
FLMP01001948
368913
Actinomycetota
GGT
Thr
>WENV170568479
FLMP01043641
161283
Actinomycetota
GTC
Asp
>WENV170568174
FLMP01020862
277601
Actinomycetota
GTG
His
>WENV170568869
FLMP01089585
304751
Actinomycetota
GTT
Asn
>WENV170568851
FLMP01086588
258145
Actinomycetota
GTT
Asn
>WENV170567760
FLMP01004902
267014
Actinomycetota
GTT
Asn
>WENV170568377
FLMP01034551
257001
Actinomycetota
TAC
Val
>WENV170568647
FLMP01059614
225033
Actinomycetota
TAC
Val
>WENV170568407
FLMP01036980
264942
Actinomycetota
TCT
Arg
>WENV170567523
FLMP01001513
263223
Actinomycetota
TGC
Ala
>WENV170569926
FLMP01355562
267560
Actinomycetota
TGC
Ala
>WENV170568209
FLMP01022467
267514
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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