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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180017279
FSWR01000052
167857
Actinomycetota
GGC
Ala
>WENV180017270
FSWR01000042
166451
Actinomycetota
>WENV180017278
FSWR01000052
158362
Actinomycetota
TGG
Pro
>WENV180017296
FSWR01000068
448108
Actinomycetota
GCA
Cys
>WENV180017268
FSWR01000035
256995
Actinomycetota
CGC
Ala
>WENV180017305
FSWR01000086
256995
Actinomycetota
CGC
Ala
>WENV180017282
FSWR01000053
65352
Actinomycetota
CAG
Leu
>WENV180017291
FSWR01000062
158778
Actinomycetota
GTC
Asp
>WENV180017266
FSWR01000032
260796
Actinomycetota
TTT
Lys
>WENV180017271
FSWR01000042
257001
Actinomycetota
TAC
Val
>WENV180017273
FSWR01000048
291414
Actinomycetota
CTT
Lys
>WENV180017284
FSWR01000057
49729
Actinomycetota
GGA
Ser
>WENV180017265
FSWR01000032
167864
Actinomycetota
TGT
Thr
>WENV180017263
FSWR01000028
260056
Actinomycetota
CTC
Glu
>WENV180017294
FSWR01000065
260056
Actinomycetota
CTC
Glu
>WENV180017290
FSWR01000062
257380
Actinomycetota
TTC
Glu
>WENV180017301
FSWR01000075
260055
Actinomycetota
ACG
Arg
>WENV180017272
FSWR01000043
369061
Actinomycetota
CTG
Gln
>WENV180017297
FSWR01000068
369064
Actinomycetota
GAC
Val
>WENV180017289
FSWR01000061
370521
Actinomycetota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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