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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180017295
FSWR01000068
338763
Actinomycetota
GCC
Gly
>WENV180017291
FSWR01000062
146607
Actinomycetota
GTC
Asp
>WENV180017271
FSWR01000042
236241
Actinomycetota
TAC
Val
>WENV180017275
FSWR01000052
411983
Actinomycetota
TCC
Gly
>WENV180017290
FSWR01000062
237596
Actinomycetota
TTC
Glu
>WENV180017267
FSWR01000035
374962
Actinomycetota
CCT
Arg
>WENV180017272
FSWR01000043
366330
Actinomycetota
CTG
Gln
>WENV180017294
FSWR01000065
244362
Actinomycetota
CTC
Glu
>WENV180017263
FSWR01000028
244362
Actinomycetota
CTC
Glu
>WENV180017265
FSWR01000032
149979
Actinomycetota
TGT
Thr
>WENV180017297
FSWR01000068
339525
Actinomycetota
GAC
Val
>WENV180017284
FSWR01000057
45081
Actinomycetota
GGA
Ser
>WENV180017269
FSWR01000042
251503
Actinomycetota
GTT
Asn
>WENV180017281
FSWR01000053
235444
Actinomycetota
TGC
Ala
>WENV180017303
FSWR01000077
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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