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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180030976
FTJN01819717
133582
Actinomycetota
TTG
Gln
>WENV180030832
FTJN01144014
65352
Actinomycetota
CAG
Leu
>WENV180030898
FTJN01394075
158778
Actinomycetota
GTC
Asp
>WENV180030810
FTJN01086879
260796
Actinomycetota
TTT
Lys
>WENV180030780
FTJN01051474
257001
Actinomycetota
TAC
Val
>WENV180030816
FTJN01097338
257001
Actinomycetota
TAC
Val
>WENV180030919
FTJN01476048
257001
Actinomycetota
TAC
Val
>WENV180030895
FTJN01380894
323060
Actinomycetota
CTT
Lys
>WENV180030959
FTJN01756822
323060
Actinomycetota
CTT
Lys
>WENV180030815
FTJN01096701
49729
Actinomycetota
GGA
Ser
>WENV180030681
FTJN01002835
226114
Actinomycetota
>WENV180030902
FTJN01418999
380815
Actinomycetota
CTG
Gln
>WENV180030674
FTJN01002612
407982
Actinomycetota
CCT
Arg
>WENV180030856
FTJN01201999
448022
Actinomycetota
CCC
Gly
>WENV180030915
FTJN01459821
369061
Actinomycetota
CTG
Gln
>WENV180030887
FTJN01354820
10948
Actinomycetota
GCT
Ser
>WENV180030692
FTJN01003090
448853
Actinomycetota
GCA
Cys
>WENV180030942
FTJN01635720
370521
Actinomycetota
CCG
Arg
>WENV180030903
FTJN01427998
257378
Actinomycetota
CGT
Thr
>WENV180030865
FTJN01240642
370829
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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