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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180030681
FTJN01002835
153188
Actinomycetota
CAT
Met
>WENV180030687
FTJN01002971
235444
Actinomycetota
TGC
Ala
>WENV180030691
FTJN01003090
344531
Actinomycetota
GCC
Gly
>WENV180030692
FTJN01003090
425058
Actinomycetota
GCA
Cys
>WENV180030780
FTJN01051474
236241
Actinomycetota
TAC
Val
>WENV180030815
FTJN01096701
45081
Actinomycetota
GGA
Ser
>WENV180030816
FTJN01097338
236241
Actinomycetota
TAC
Val
>WENV180030860
FTJN01213556
254531
Actinomycetota
>WENV180030898
FTJN01394075
146607
Actinomycetota
GTC
Asp
>WENV180030902
FTJN01418999
371830
Actinomycetota
CTG
Gln
>WENV180030903
FTJN01427998
237877
Actinomycetota
CGT
Thr
>WENV180030915
FTJN01459821
366330
Actinomycetota
CTG
Gln
>WENV180030919
FTJN01476048
236241
Actinomycetota
TAC
Val
>WENV180030976
FTJN01819717
122002
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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