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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170657653
JTFP01006857
135332
Thermodesulfobacteriota
TTC
Glu
>WENV170657830
JTFP01024370
135332
Thermodesulfobacteriota
TTC
Glu
>WENV170658099
JTFP01054797
135332
Thermodesulfobacteriota
TTC
Glu
>WENV170658637
JTFP01170030
135332
Thermodesulfobacteriota
TTC
Glu
>WENV170658639
JTFP01170030
135332
Thermodesulfobacteriota
TTC
Glu
>WENV170657681
JTFP01009220
250271
Thermodesulfobacteriota
TGC
Ala
>WENV170657532
JTFP01000299
184695
Thermodesulfobacteriota
CGG
Pro
>WENV170657573
JTFP01002380
134595
Thermodesulfobacteriota
TTC
Glu
>WENV170657773
JTFP01017999
134595
Thermodesulfobacteriota
TTC
Glu
>WENV170657886
JTFP01029805
167749
Thermodesulfobacteriota
CCA
Trp
>WENV170658046
JTFP01048941
242994
Thermodesulfobacteriota
GGC
Ala
>WENV170658730
JTFP01193698
174262
Thermodesulfobacteriota
GTC
Asp
>WENV170657565
JTFP01001759
174262
Thermodesulfobacteriota
GTC
Asp
>WENV170657563
JTFP01001759
174262
Thermodesulfobacteriota
GTC
Asp
>WENV170657845
JTFP01025632
152132
Thermodesulfobacteriota
CAT
Met
>WENV170658006
JTFP01042837
152132
Thermodesulfobacteriota
CAT
Met
>WENV170657972
JTFP01038606
45804
Thermodesulfobacteriota
CGA
Ser
>WENV170657645
JTFP01006559
45804
Thermodesulfobacteriota
CGA
Ser
>WENV170657693
JTFP01010874
80747
Thermodesulfobacteriota
GTA
Tyr
>WENV170657629
JTFP01005602
80747
Thermodesulfobacteriota
GTA
Tyr
>WENV170658681
JTFP01178838
256283
Thermodesulfobacteriota
GAA
Phe
>WENV170657672
JTFP01008000
256283
Thermodesulfobacteriota
GAA
Phe
>WENV170658255
JTFP01076458
243213
Thermodesulfobacteriota
CGC
Ala
>WENV170658411
JTFP01106838
161086
Thermodesulfobacteriota
CAT
Met
>WENV170658090
JTFP01054050
161086
Thermodesulfobacteriota
CAT
Met
>WENV170657589
JTFP01003805
161086
Thermodesulfobacteriota
CAT
Met
>WENV170658456
JTFP01114760
315876
Thermodesulfobacteriota
TGC
Ala
>WENV170658021
JTFP01045792
413572
Thermodesulfobacteriota
GCA
Cys
>WENV170657578
JTFP01003100
413572
Thermodesulfobacteriota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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