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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170682339
LFIK01000004
263987
Gammaproteobacteria
TTT
Lys
>WENV170682340
LFIK01000004
263987
Gammaproteobacteria
TTT
Lys
>WENV170682342
LFIK01000007
207358
Gammaproteobacteria
CCG
Arg
>WENV170682355
LFIK01000016
260610
Gammaproteobacteria
TAC
Val
>WENV170682357
LFIK01000016
260610
Gammaproteobacteria
TAC
Val
>WENV170682356
LFIK01000016
236600
Gammaproteobacteria
GTC
Asp
>WENV170682358
LFIK01000016
236600
Gammaproteobacteria
GTC
Asp
>WENV170682557
LFIK01000319
59452
Gammaproteobacteria
TGA
Ser
>WENV170682633
LFIK01000667
257697
Gammaproteobacteria
GTG
His
>WENV170682644
LFIK01000695
275223
Gammaproteobacteria
GAA
Phe
>WENV170682671
LFIK01000801
263086
Gammaproteobacteria
GTT
Asn
>WENV170682693
LFIK01000931
475111
Gammaproteobacteria
TCC
Gly
>WENV170682747
LFIK01001055
175355
Gammaproteobacteria
CCT
Arg
>WENV170682994
LFIK01003230
263987
Gammaproteobacteria
TTT
Lys
>WENV170682995
LFIK01003230
263987
Gammaproteobacteria
TTT
Lys
>WENV170683038
LFIK01003706
270870
Gammaproteobacteria
GAA
Phe
>WENV170683039
LFIK01003706
410587
Gammaproteobacteria
>WENV170683040
LFIK01003706
258349
Gammaproteobacteria
TGT
Thr
>WENV170683118
LFIK01005077
77430
Gammaproteobacteria
CAG
Leu
>WENV170683137
LFIK01005323
475111
Gammaproteobacteria
TCC
Gly
>WENV170683157
LFIK01005596
369546
Gammaproteobacteria
GGT
Thr
>WENV170683177
LFIK01006158
167676
Gammaproteobacteria
GGG
Pro
>WENV170683188
LFIK01006330
210855
Gammaproteobacteria
ACG
Arg
>WENV170683214
LFIK01007033
159506
Gammaproteobacteria
CCG
Arg
>WENV170683238
LFIK01007529
207358
Gammaproteobacteria
CCG
Arg
>WENV170683259
LFIK01007789
159512
Gammaproteobacteria
GGG
Pro
>WENV170683309
LFIK01008751
65311
Gammaproteobacteria
TAA
Leu
>WENV170683409
LFIK01011106
261229
Gammaproteobacteria
GTT
Asn
>WENV170683410
LFIK01011106
309836
Gammaproteobacteria
TTC
Glu
>WENV170683412
LFIK01011106
309836
Gammaproteobacteria
TTC
Glu
>WENV170683408
LFIK01011106
274327
Gammaproteobacteria
GTT
Asn
>WENV170683407
LFIK01011106
220289
Gammaproteobacteria
CAT
Met
>WENV170683462
LFIK01012321
76664
Gammaproteobacteria
GAG
Leu
>WENV170683492
LFIK01013288
220289
Gammaproteobacteria
CAT
Met
>WENV170683493
LFIK01013390
257590
Gammaproteobacteria
GGT
Thr
>WENV170683528
LFIK01014815
309836
Gammaproteobacteria
TTC
Glu
>WENV170683581
LFIK01016322
380412
Gammaproteobacteria
GTT
Asn
>WENV170683632
LFIK01017198
159512
Gammaproteobacteria
GGG
Pro
>WENV170683659
LFIK01018261
260355
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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