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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180041437
LLBZ010133746
173668
Alphaproteobacteria
TCT
Arg
>WENV180040737
LLBZ010009862
81064
Alphaproteobacteria
GTA
Tyr
>WENV180040629
LLBZ010002958
191197
Alphaproteobacteria
CCG
Arg
>WENV180040909
LLBZ010023020
146683
Alphaproteobacteria
GTG
His
>WENV180041722
LLBZ010343884
338286
Alphaproteobacteria
TTG
Gln
>WENV180041130
LLBZ010049520
338282
Alphaproteobacteria
GTT
Asn
>WENV180040741
LLBZ010010250
385404
Alphaproteobacteria
CTC
Glu
>WENV180040789
LLBZ010014703
236004
Alphaproteobacteria
TTT
Lys
>WENV180040841
LLBZ010016904
202028
Alphaproteobacteria
GTG
His
>WENV180040713
LLBZ010008500
173246
Alphaproteobacteria
CCT
Arg
>WENV180041041
LLBZ010037046
339884
Alphaproteobacteria
TTC
Glu
>WENV180041014
LLBZ010034045
237281
Alphaproteobacteria
CGT
Thr
>WENV180041004
LLBZ010033269
359842
Alphaproteobacteria
GAC
Val
>WENV180041307
LLBZ010091197
80837
Alphaproteobacteria
TAA
Leu
>WENV180040663
LLBZ010005284
338622
Alphaproteobacteria
GTT
Asn
>WENV180040727
LLBZ010009554
25307
Alphaproteobacteria
GGA
Ser
>WENV180041178
LLBZ010059016
113767
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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